General Information
-
DRAMP ID
- DRAMP20809
-
Peptide Name
- RI18 (PMAP-36 peptide derivative)
-
Source
- Synthetic construct
-
Family
- Derived from PMAP-36
-
Gene
- Not found
-
Sequence
- RKKTRKRLKKIGKVLKWI
-
Sequence Length
- 18
-
UniProt Entry
- No entry found
-
Protein Existence
- Synthetic
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- [Ref.27251456] Gram-positive bacteria: Staphylococcus aureus 29213 (MIC=4 μM, MBC=4 μM), Staphylococcus aureus 25923 (MIC=8 μM, MBC=8 μM), Staphylococcus epidermidis 12228 (MIC=4 μM, MBC=16 μM), Bacillus subtilis 63501 (MIC=1 μM, MBC=2 μM);
- Gram-negative bacteria: Escherichia coli 25922 (MIC=2 μM, MBC=4 μM), Escherichia coli EC183 (MIC=1 μM, MBC=2 μM), Escherichia coli 1005 (MIC=2 μM, MBC=4 μM), Salmonella typhimurium C77-31 (MIC=2 μM, MBC=4 μM);
- Fungi: Candida albicans 2.2086 (MIC=16 μM, MFC=32 μM), Candida albicans CA276 (MIC=8 μM, MFC=16 μM), Candida tropicalis 2.1975 (MIC=2 μM, MFC=4 μM), Candida krusei 2.1857 (MIC=4 μM, MFC=8 μM).
-
Hemolytic Activity
-
- [Ref.27251456] 5% hemolysis at 128 μM, MHC=128 μM against human red blood cells.
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- None
-
Stereochemistry
- L
-
Structure
- Alpha helix
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP20809.
Physicochemical Information
-
Formula
- C106H195N35O20
Absent Amino Acids
- ACDEFHMNPQSY
Common Amino Acids
- K
Mass
- 2279.94
PI
- 12.32
Basic Residues
- 10
Acidic Residues
- 0
Hydrophobic Residues
- 6
Net Charge
- +10
-
Boman Index
- -5919
Hydrophobicity
- -1.222
Aliphatic Index
- 102.78
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 5500
Absorbance 280nm
- 323.53
Polar Residues
- 2
DRAMP20809
Comments Information
Function
- Antimicrobial activity against Gram-negative bacteria, Gram-positive bacteria and Fungi..
Literature Information
- ·Literature 1
-
Title
- Antimicrobial activity, improved cell selectivity and mode of action of short PMAP-36-derived peptides against bacteria and Candida.
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Pubmed ID
- 27251456
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Reference
- Sci Rep. 2016 Jun 2;6:27258.
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Author
- Lyu Y, Yang Y, Lyu X, Dong N, Shan A.