General Information
-
DRAMP ID
- DRAMP21305
-
Peptide Name
- R8 (De novo synthesis)
-
Source
- Synthetic construct
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- RRRRRRRR
-
Sequence Length
- 8
-
UniProt Entry
- No entry found
-
Protein Existence
- Synthetic form
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
-
Target Organism
-
- [Ref.23085001] Gram-positive bacteria : Staphylococcus aureus(ATCC 33591)(MIC=44 μM);
- Gram-negative bacteria : Escherichia coli(ATCC 25922)(MIC=44 μM)
-
Hemolytic Activity
-
- [Ref.23085001] HC50>128 μM against human red blood cells
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- None
-
Stereochemistry
- L
-
Structure
- Alpha helix
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP21305.
Physicochemical Information
-
Formula
- C48H98N32O9
Absent Amino Acids
- ACDEFGHIKLMNPQSTV
Common Amino Acids
- R
Mass
- 1267.52
PI
- 12.85
Basic Residues
- 8
Acidic Residues
- 0
Hydrophobic Residues
- 0
Net Charge
- +8
-
Boman Index
- -11936
Hydrophobicity
- -4.5
Aliphatic Index
- 0
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 0
DRAMP21305
Comments Information
Function
- Antibacterial activity against Gram-positive bacteria and Gram-negative bacteria
Literature Information
- ·Literature 1
-
Title
- Antimicrobial and cell-penetrating properties of penetratin analogs: effect of sequence and secondary structure.
-
Pubmed ID
- 23085001
-
Reference
- Biochim Biophys Acta. 2013 Feb;1828(2):223-32. doi: 10.1016/j.bbamem.2012.10.010.
-
Author
- Bahnsen JS, Franzyk H, Sandberg-Schaal A, Nielsen HM