General Information
-
DRAMP ID
- DRAMP21620
-
Peptide Name
- KFGF
-
Source
- Synthetic construct
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- AAVLLPVLLAAP
-
Sequence Length
- 12
-
UniProt Entry
- No entry found
-
Protein Existence
- Synthetic form
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
-
Target Organism
-
- [Ref.28921993] Gram-positive bacteria: Staphylococcus aureus (MIC > 256 μg/mL), Enterococcus faecalis (MIC > 256 μg/mL);
- Gram-negative bacteria: Escherichia coli (MIC > 256 μg/mL), Pseudomonas aeruginosa (MIC > 256 μg/mL)
-
Hemolytic Activity
-
- [Ref.28921993] 0.4%, 0.2%, 0.3%, 0.2%, 1.5%, 0.2% and 0.1% hemolysis against human red blood cells at 7.5, 10, 15, 20, 25, 30 and 40 μg/ml.
-
Cytotoxicity
-
- [Ref.28921993] The toxicity of KFGF toward HEK293 and HeLa cells is much less than nonaarginine (R9) by use of flow cytometry and the peptide doesn't show any cytotoxicity at 2 μM.
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- None
-
Stereochemistry
- L
-
Structure
- ①Disordered conformation in aqueous solutions [pure water (H₂O), phosphate buffer (PB, 10 mM), and phosphate buffer with high salt (NaF, 100 mM)]. ②31
-
Structure Description
- Our CD data show that all four linear peptides were generally disordered in aqueous solution, as expected, but prominent effects were seen regarding the impact of the staple.
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP21620.
Physicochemical Information
-
Formula
- C₅₆H₉₈N₁₂O₁₃
Absent Amino Acids
- CDEFGHIKMNQRSTWY
Common Amino Acids
- AL
Mass
- 1147.47
PI
- 5.57
Basic Residues
- 0
Acidic Residues
- 0
Hydrophobic Residues
- 10
Net Charge
- 0
-
Boman Index
- 3500
Hydrophobicity
- 2.3
Aliphatic Index
- 211.67
Half Life
-
- Mammalian:4.4 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 0
DRAMP21620
Comments Information
Function
- Antibacterial activity against Gram-positive and Gram-negative bacteria.
Literature Information
- ·Literature 1
-
Title
- Lactam-Stapled Cell-Penetrating Peptides: Cell Uptake and Membrane Binding Properties.
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Pubmed ID
- 28921993
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Reference
- J Med Chem. 2017 Oct 12;60(19):8071-8082. doi: 10.1021/acs.jmedchem.7b00813. Epub 2017 Sep 26.
-
Author
- Marco J Klein, Samuel Schmidt, Parvesh Wadhwani, Jochen Bürck, Johannes Reichert, Sergii Afonin, Marina Berditsch, Tim Schober, Roland Brock, Manfred Kansy, Anne S Ulrich