General Information
-
DRAMP ID
- DRAMP01319
-
Peptide Name
- Cathelicidin-AL (Gly-rich; Frogs, amphibians, animals)
-
Source
- Amolops loloensis
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- RRSRRGRGGGRRGGSGGRGGRGGGGRSGAGSSIAGVGSRGGGGGRHYA
-
Sequence Length
- 48
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
-
SMILES
- CC[C@@H](C)[C@H](NC(=O)[C@H](CO)NC(=O)[C@H](CO)NC(=O)CNC(=O)[C@H](C)NC(=O)CNC(=O)[C@H](CO)NC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)CNC(=O)CNC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)CNC(=O)[C@H](CO)NC(=O)CNC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)CNC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CO)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](C)C(=O)NCC(=O)N[C@H](C(=O)NCC(=O)N[C@@H](CO)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](C)C(=O)O)C(C)C
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- Gram-positive bacteria:
Target Organism Activity Staphylococcus aureus ATCC25923 MIC=6.25 µg/ml Staphylococcus aureus ATCC43300 MIC=6.25 µg/ml Bacillus subtilis (MIC=100 µg/ml); - - Gram-negative bacteria:
Target Organism Activity Escherichia coli ML-35P MIC=25 µg/ml Psecdomonas aeruginosa PA01 MIC=12.5 µg/ml Psecdomonas aeruginosa ATCC27853 MIC=6.25 µg/ml - Yeast:
Target Organism Activity Candida albicans ATCC2002 MIC=50 µg/ml
- Gram-positive bacteria:
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- [Ref.22009138]No cytotoxic against HUVEC or RMMCs at the concentration of 0.4 mg/ml.
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Binding Target
- Not found
Structure Information
Physicochemical Information
-
Formula
- C171H296N86O56
Absent Amino Acids
- CDEFKLMNPQTW
Common Amino Acids
- G
Mass
- 4452.77
PI
- 12.7
Basic Residues
- 13
Acidic Residues
- 0
Hydrophobic Residues
- 5
Net Charge
- +13
-
Boman Index
- -168.23
Hydrophobicity
- -1.217
Aliphatic Index
- 20.42
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 1490
Absorbance 280nm
- 31.7
Polar Residues
- 30
DRAMP01319
Comments Information
Function
- Has antibacterial against Gram-positive and Gram-negative bacteria. Also has antifungal activity against C. albicans.
Literature Information
- ·Literature 1
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Title
- Amphibian cathelicidin fills the evolutionary gap of cathelicidin in vertebrate.
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Pubmed ID
- 22009138
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Reference
- Amino Acids. 2012 Aug;43(2):677-685.
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Author
- Hao X, Yang H, Wei L, Yang S, Zhu W, Ma D, Yu H, Lai R.
