General Information
-
DRAMP ID
- DRAMP02229
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Peptide Name
- Ranatuerin-2 (Frogs, amphibians, animals)
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Source
- Lithobates catesbeiana (American bullfrog) (Rana catesbeiana)
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Family
- Belongs to the frog skin active peptide family (Brevinin subfamily)
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Gene
- Not found
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Sequence
- GLFLDTLKGAAKDVAGKLEGLKCKITGCKLP
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Sequence Length
- 31
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UniProt Entry
- P82742
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Protein Existence
- Protein level
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SMILES
- CC[C@@H](C)[C@@H]1NC(=O)[C@H](CCCCN)NC(=O)[C@@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)CNC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)CNC(=O)[C@H](CCCCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(C)C)NC(=O)CN)[C@@H](C)O)C(C)C)CSSC[C@@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(=O)N2CCC[C@H]2C(=O)O)NC(=O)CNC(=O)[C@H]([C@@H](C)O)NC1=O
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+
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Target Organism
-
- [Ref.9784389] Gram-positive bacterium:
Target Organism Activity Staphylococcus aureus MIC=60 µM
- [Ref.9784389] Gram-positive bacterium:
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Hemolytic Activity
-
- [Ref.9784389] It has no detectable hemolytic activity at aconcentration of 20µg/ml against human red blood cell.
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
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N-terminal Modification
- Free
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C-terminal Modification
- Free
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Nonterminal Modifications and Unusual Amino Acids
- Disulfide bond between Cys23 and Cys28.
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Stereochemistry
- L
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Structure
- Alpha helix
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Structure Description
- Not found
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Predicted Structure
- There is no predicted structure for DRAMP02229.
Physicochemical Information
-
Formula
- C143H247N37O40S2
Absent Amino Acids
- HMNQRSWY
Common Amino Acids
- KL
Mass
- 3188.88
PI
- 9.19
Basic Residues
- 6
Acidic Residues
- 3
Hydrophobic Residues
- 12
Net Charge
- +3
-
Boman Index
- -8.54
Hydrophobicity
- 0.187
Aliphatic Index
- 107.1
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 125
Absorbance 280nm
- 4.17
Polar Residues
- 9
DRAMP02229
Comments Information
Function
- Antibacterial activity against Gram-positive bacterium S.aureus. Has no detectable hemolytic activity.
Literature Information
- ·Literature 1
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Title
- Ranatuerins: antimicrobial peptides isolated from the skin of the American bullfrog, Rana catesbeiana.
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Pubmed ID
- 9784389
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Reference
- Biochem Biophys Res Commun. 1998 Sep 29;250(3):589-592.
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Author
- Goraya J, Knoop FC, Conlon JM.
