General Information
-
DRAMP ID
- DRAMP03834
-
Peptide Name
- Palustrin-2ISb-des-C7-23,29S
-
Source
- Synthetic construct
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- GLWNSIKIAGKKLFVNVLDKIRSKVAGGS
-
Sequence Length
- 29
-
UniProt Entry
- No entry found
-
Protein Existence
- Synthetic
-
SMILES
- CC[C@@H](C)[C@H](NC(=O)C[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CCCCN)NC(=O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@H](CC(C)C)NC(=O)CN)[C@H](C)CC)[C@H](C)CC)C(C)C)C(C)C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(=O)NCC(=O)O)C(=O)N[C@@H](CO)C(=O)N[C@H](C(=O)NCC(=O)N[C@@H](CO)C(=O)O)C(C)C
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
-
Target Organism
-
- Gram-negative bacterium:
Target Organism Activity Escherichia coli (MIC=3.1 µM); - - Gram-positive bacteria:
Target Organism Activity Staphylococcus aureus MIC=6.3 µM S. aureus (MRSA) (MIC=25 µM); - - yeast Candida albicans (MIC=100 µM).
- Gram-negative bacterium:
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
Physicochemical Information
-
Formula
- C142H240N40O37
Absent Amino Acids
- CEHMPQTY
Common Amino Acids
- K
Mass
- 3099.71
PI
- 10.58
Basic Residues
- 6
Acidic Residues
- 1
Hydrophobic Residues
- 13
Net Charge
- +5
-
Boman Index
- -20.54
Hydrophobicity
- 0.155
Aliphatic Index
- 117.59
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5500
Absorbance 280nm
- 196.43
Polar Residues
- 9
DRAMP03834
Comments Information
Comment
- No comments found on DRAMP database
Literature Information
- ·Literature 1
-
Title
- Identification and structure-activity relationship of an antimicrobial peptide of the palustrin-7 family isolated from the skin of the endangered frog Odorrana ishikawae.
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Pubmed ID
- 21911019
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Reference
- Peptides. 2011 Oct;32(10):2052-2057.
-
Author
- Iwakoshi-Ukena E, Okada G, Okimoto A, Fujii T, Sumida M, Ukena K.
