General Information
-
DRAMP ID
- DRAMP39134
-
Peptide Name
- Dermaseptin K4-S4(1–10)a
-
Source
- Agalychnis dacnicolor (Giant Mexican leaf frog) (Pachymedusa dacnicolor)
-
Family
- Belongs to the frog skin active peptide (FSAP) family. Dermaseptin subfamily
-
Gene
- not found
-
Sequence
- ALWKTLLKKV
-
Sequence Length
- 10
-
UniProt Entry
- O93452(45-54)
-
Protein Existence
- homology
-
SMILES
- CC(C)C[C@H](NC(=O)[C@H](C)N)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCCN)C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@H](C(N)=O)C(C)C)[C@@H](C)O
Activity Information
-
Biological Activity
- Antimicrobial,Antibacterial,Anti-Gram+,Anti-Gram-,Antifungal,Antiprotozoal
-
Target Organism
-
- [Ref.11847217]protozoon: Leishmania major(LC50>50 µM)
- Gram-negative bacteria:
Target Organism Activity Escherichia coli MIC=50±10 µM - Gram-positive bacteria:
Target Organism Activity Staphylococcus aureus MIC>50 µM - Fungi:
Target Organism Activity Cryptococcus neoformans MIC=30±5 µM
-
Hemolytic Activity
-
- [Ref.11847217]LC50>50 µM on RBC
-
Cytotoxicity
-
- not found
-
Binding Target
- membrane
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
-
Stereochemistry
- L
-
PDB ID
- notfound
-
Predicted Structure
-
- Please click DRAMP39134_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C59H102N14O12
Absent Amino Acids
- Cys,Asp,Glu,Phe,G
Common Amino Acids
- Ala,Lys,L
Mass
- 1199.53
PI
- 10.3
Basic Residues
- 3
Acidic Residues
- 0
Hydrophobic Residues
- 6
Net Charge
- +3
-
Boman Index
- 0
Hydrophobicity
- 0.004
Aliphatic Index
- 156
Half Life
-
- Mammalian:4.4 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5500
Absorbance 280nm
- 4.59
Polar Residues
- 1
DRAMP39134
Comments Information
Literature Information
- ·Literature 1
-
Title
- Structural requirements for potent versus selective cytotoxicity for antimicrobial dermaseptin S4 derivatives
-
Pubmed ID
- 11847217
-
Reference
- J Biol Chem. 2002 May 10;277(19):16941-51
-
Author
- Kustanovich I, Shalev DE, Mikhlin M, Gaidukov L, Mor A
