General Information
-
DRAMP ID
- DRAMP39418
-
Peptide Name
- lachnospirin-1(AMP10.015_742)
-
Source
- Synthetic construct
-
Family
- Belongs to the SPHERE-III.008_812 family
-
Gene
- Not found
-
Sequence
- LKQLNRFKYKIIKIKRIIKL
-
Sequence Length
- 20
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
-
SMILES
- Not available
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
-
Target Organism
-
- [Ref.38843834]Gram-positive bacteria:
Target Organism Activity S. aureus ATCC 12600 MIC>64 μM S. aureus ATCC BAA-1556 - MRSA MIC>64 μM E. faecalis ATCC 700802 - VRE MIC>64 μM E. faecium ATCC 700221 - VRE MIC=1 μM C. aerofaciens ATCC 25986 MIC=8 μM C. scindens ATCC 35704 MIC=64 μM - Gram-negative bacteria:
Target Organism Activity A. baumannii ATCC 19606 MIC=2 μM E. coli ATCC 11775 MIC>64 μM E. coli AIC221 MIC>64 μM E. coli AIC222 - CRE MIC>64 μM K. pneumoniae ATCC 13883 MIC>64 μM P. aeruginosa PAO1 MIC>64 μM P. aeruginosa PA14 MIC>64 μM A. muciniphila ATCC BAA-835 MIC=64 μM B. fragilis ATCC 25285 MIC=64 μM B. thetaiotaomicron ATCC 29148 MIC=64 μM B. uniformis ATCC 8492 MIC=64 μM B. vulgatus ATCC 8482 MIC=64 μM P. distasonis ATCC 8503 MIC=64 μM
- [Ref.38843834]Gram-positive bacteria:
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Free
-
Nonterminal Modifications and Unusual Amino Acids
- None
-
Stereochemistry
- L
-
Structure
- Alpha helix, turn, random coil in membrane-mimicking; Alpha helix, beta sheet, turn, random coil in water
-
Structure Description
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP39418.
Physicochemical Information
-
Formula
- C123H218N34O24
Absent Amino Acids
- Ala,Cys,Asp,Glu,G
Common Amino Acids
- Phe,Ile,L
Mass
- 2557.26
PI
- 11.3
Basic Residues
- 8
Acidic Residues
- 0
Hydrophobic Residues
- 9
Net Charge
- +8
-
Boman Index
- 0
Hydrophobicity
- -0.002
Aliphatic Index
- 156
Half Life
-
- Mammalian:5.5 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 1490
Absorbance 280nm
- 0.58
Polar Residues
- 3
DRAMP39418
Comments Information
Literature Information
- ·Literature 1
-
Title
- Discovery of antimicrobial peptides in the global microbiome with machine learning
-
Pubmed ID
- 38843834
-
Reference
- Cell. 2024 Jul 11;187(14):3761-3778.e49.
-
Author
- Santos-Júnior CD, Torres MDT, Duan Y, Rodríguez Del Río Á, Schmidt TSB, Chong H, Fullam A, Kuhn M, Zhu C, Houseman A, Somborski J, Vines A, Zhao XM, Bork P, Huerta-Cepas J, de la Fuente-Nunez C, Coelho LP.
