General Information
-
DRAMP ID
- DRAMP00993
-
Peptide Name
- WjAMP-1 (C-terminal domain of hevein; Plant defensin)
-
Source
- Wasabia japonica L. (Wasabi plant) (Wasabia japonica)
-
Family
- Not found
-
Gene
- WjAMP-1
-
Sequence
- QAGGQTCPGGICCSQWGYCGTTADYCSPNNNCQSNCWASG
-
Sequence Length
- 40
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram-, Antifungal
-
Target Organism
-
- Gram-negative bacteria: Escherichia coli (IC50=27.5 µg/ml), Pseudomonas cichorii (IC50=13.8 µg/ml), Pseudomonas glumae (IC50=20 µg/ml), Pseudomonas plantarii (IC50=22.5 µg/ml), Agrobacterium tumefaciens (IC50=12.5 µg/ml).
- Fungi: Alternaria alternata (IC50=5.8 µg/ml), Botrytis cinerea (IC50=15 µg/ml), Fusarium solani (IC50=8.4 µg/ml), Magnaporte grisea (IC50=80 µg/ml).
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Chitin-binding
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00993.
Physicochemical Information
-
Formula
- C164H238N50O60S7
Absent Amino Acids
- EFHKLMRV
Common Amino Acids
- CG
Mass
- 4094.41
PI
- 3.8
Basic Residues
- 0
Acidic Residues
- 1
Hydrophobic Residues
- 6
Net Charge
- -1
-
Boman Index
- -48.48
Hydrophobicity
- -0.495
Aliphatic Index
- 17.25
Half Life
-
- Mammalian:0.8 hour
- Yeast:10 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 14355
Absorbance 280nm
- 368.08
Polar Residues
- 27
DRAMP00993

Comments Information
Function
- WjAMP-1 showed antimicrobial activity against both fungi and bacteria.
Literature Information
- ·Literature 1
-
Title
- C-terminal domain of a hevein-like protein from Wasabia japonica has potent antimicrobial activity.
-
Pubmed ID
- 12668776
-
Reference
- Plant Cell Physiol. 2003 Mar;44(3):296-303.
-
Author
- Kiba A, Saitoh H, Nishihara M, Omiya K, Yamamura S.