Useful Links

Useful Resources

(National Center for Biotechnology Information)
The NCBI holds a series of databases relevant to biotechnology and biomedicine. Major databases include GenBank for DNA sequences and PubMed for biomedical literature.
(Expert Protein Analysis System)
ExPASy is a bioinformatics resource portal accessing many scientific resources, databases and software tools in different areas of life sciences. The largest clinical trials database, currently holding registrations from over 144,133 trials from more than 170 countries in the world.
(European Union Drug Regulating Authorities Clinical Trials)
EudraCT is the European Clinical Trials Database of all clinical trials commencing in the European Union from 1 May 2004 onwards.
Lens The Lens is an online patent search facility and knowledge resource, which allows free searching of over 10 million full-text patent documents.

General Databases

UniProtKB/Swiss-Prot UniProtKB/Swiss-Prot is a high-quality, manually annotated, non-redundant protein sequence and annotation database.
PDB (Protein Data Bank) PDB is a repository for the 3-D structural data of Biological macromolecules (X-ray or NMR method)
PubMed PubMed is a free database accessing primarily the MEDLINE database of references and abstracts on life sciences and biomedical topics. As of 24 March 2013, PubMed has over 22.6 million citations.

Bioactive Peptide Databases

PepBank A database of peptides based on sequence text mining and public peptide data sources.
(old version: APD2/APD)
Antimicrobial peptide database, currently containing 3065 Natural AMPs.
CAMP Database of antimicrobial peptides and proteins.
AMPer A database and an dutomated discovery tool for gene encoded antimicrobial peptides. The original link is invalid.
A manually curated database of known and putative antimicrobial peptides.
BAGEL A genome mining tool for putative bacteriocin gene clusters detection.
BACTIBASE BACTIBASE is a data repository of bacteriocin natural antimicrobial peptides
PhytAMP Database of plant antimicrobial peptides and proteins.
Defensins knowledgebase Database of antimicrobial peptides from the defensins family.
PenBase PenBase is a curated database devoted to Shrimp Penaeidin.
RAPD Database of recombinantly-produced antimicrobial peptides.
DAPD Database of Anuran defense peptides.
MilkAMP Database of Dairy-derived AMPs.
AVPdb Database of Antiviral peptides.
HIPdb Database of HIV-inhibiting peptides.
YADAMP Database of Antibacterial peptides.
Thiobase Database of Thiopeptides.
Peptaibols Database of Peptaibols.
Cybase Database of Cyclotides.
DBAASP Database of AMPsˈ activity and structure.
Hemolytik Database of Hemolytic activity of AMPs.

Disclaimer: For links available from this website, we do not assume any legal liability or responsibility for the accuracy, completeness, or usefulness of any information.

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