General Information
-
DRAMP ID
- DRAMP01301
-
Peptide Name
- Phylloseptin-1 (PS-1; Frogs, amphibians, animals)
-
Source
- Phyllomedusa hypochondrialis (Orange-legged leaf frog)
-
Family
- Not found
-
Gene
- psn1
-
Sequence
- FLSLIPHAINAVSAIAKHN
-
Sequence Length
- 19
-
UniProt Entry
- P84566
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal, Antiprotozoal
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Target Organism
-
- [Ref.15752569]Gram-positive bacteria: Staphylococcus aureus (MIC=7.9 µM), Enterococcus faecalis (MIC=4.0 µM);
- Gram-negative bacteria: Escherichia coli (MIC=7.9 µM), Psecdomonas aeruginosa (MIC=4 µM), Psecdomonas aeruginosa wt (MIC=3 µM).
-
Hemolytic Activity
-
- [Ref:15752569]0.3% hemolytic activity at 4 μM, 0.57% hemolytic activity at 8 μM, 0.6% hemolytic activity at 16 μM, 0.98% hemolytic activity at 32 μM, 1.98% hemolytic activity at 64 μM against human red blood cells
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Cell membrane
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- Free
-
Stereochemistry
- L
-
Structure
- Alpha helix (1 helices; 14 residues)
-
Structure Description
- The antimicrobial phylloseptin peptides adopt alpha-helical conformations in membrane environments which are stabilized by electrostatic interactions of the helix dipole as well as other contributions such hydrophobic and capping interactions.(Ref.2)
-
Helical Wheel Diagram
-
PDB ID
- 2JQ0 resolved by NMR.
- 2JQ0-> 
-
Predicted Structure
- Please click DRAMP01301_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C93H150N26O24
Absent Amino Acids
- CDEGMQRTWY
Common Amino Acids
- A
Mass
- 2016.37
PI
- 8.76
Basic Residues
- 3
Acidic Residues
- 0
Hydrophobic Residues
- 11
Net Charge
- +3
-
Boman Index
- 3.91
Hydrophobicity
- 0.779
Aliphatic Index
- 138.95
Half Life
-
- Mammalian:1.1 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 4
DRAMP01301
Comments Information
Function
- Atomic force microscopy experiments indicated that the bacteriolytic properties of these peptides might be related to their disruptive action on the cell membrane. PS-1 did not exhibit significant hemolytic activity on human erythrocytes.
Tissue specificity
- Expressed by the skin glands.
PTM
- C-terminal amidation.
Literature Information
- ·Literature 1
-
Title
- Phylloseptins: a novel class of anti-bacterial and anti-protozoan peptides from the Phyllomedusa genus.
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Pubmed ID
- 15752569
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Reference
- Peptides. 2005 Apr;26(4):565-573.
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Author
- Leite JR, Silva LP, Rodrigues MI, Prates MV, Brand GD, Lacava BM, Azevedo RB, Bocca AL, Albuquerque S, Bloch C Jr.
- ·Literature 2
-
Title
- Solution NMR structures of the antimicrobial peptides phylloseptin-1, -2, and -3 and biological activity: the role of charges and hydrogen bonding interactions in stabilizing helix conformations.
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Pubmed ID
- 18656510
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Reference
- Peptides. 2008 Oct;29(10):1633-1644.
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Author
- Resende JM, Moraes CM, Prates MV, Cesar A, Almeida FC, Mundim NC, Valente AP, Bemquerer MP, Piló-Veloso D, Bechinger B.