General Information
-
DRAMP ID
- DRAMP01362
-
Peptide Name
- Frenatin-3 (Frogs, amphibians, animals)
-
Source
- Litoria infrafrenata (Giant tree frog) (White-lipped tree frog)
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- GLMSVLGHAVGNVLGGLFKS
-
Sequence Length
- 20
-
UniProt Entry
- P56249
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
-
Target Organism
-
- Gram-negative bacterium: Escherichia coli (MIC=50 µg/ml);
- Gram-positive bacteria: Leuconostoc mesenteroides (MIC=25 µg/ml), Bacillus cereus (MIC=12.5 µg/ml), Micrococcus luteus (MIC=1.5 µg/ml), Pastewella haemolytica (MIC=0.8 µg/ml), Streptococcus uberis (MIC=50 µg/ml).
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Free
-
Nonterminal Modifications and Unusual Amino Acids
- Free
-
Stereochemistry
- L
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- Please click DRAMP01362_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C88H146N24O24S
Absent Amino Acids
- CDEIPQRTWY
Common Amino Acids
- G
Mass
- 1956.33
PI
- 8.76
Basic Residues
- 2
Acidic Residues
- 0
Hydrophobic Residues
- 9
Net Charge
- +2
-
Boman Index
- 19.99
Hydrophobicity
- 1.005
Aliphatic Index
- 126.5
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 8
DRAMP01362
Comments Information
Function
- Wide spectrum antimicrobial peptide. Considered to interact with the outer lipid layer of the bacterial cell, penetrate the bacterial membrane, form ion channels, and ultimately kill the cell.
Tissue specificity
- Expressed by the skin parotoid and/or rostral glands.
Literature Information
- ·Literature 1
-
Title
- The structures of the frenatin peptides from the skin secretion of the giant tree frog Litoria infrafrenata.
-
Pubmed ID
- 9225251
-
Reference
- J Pept Sci. 1996 Mar-Apr;2(2):117-124.
-
Author
- Raftery MJ, Waugh RJ, Bowie JH, Wallace JC, Tyler MJ.