General Information
-
DRAMP ID
- DRAMP29095
-
Peptide Name
- Turgencin B
-
Source
- Synoicum turgens
-
Family
- Not found
-
Gene
- N/A
-
Sequence
- GIKEMLCNMACAQTVCKKSGGPLCDTCQAACKALG
-
Sequence Length
- 35
-
UniProt Entry
- C0HLN6
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial,Anti-Gram+, Anti-Gram-,Anti-cancer
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Target Organism
-
- [Ref.31940927]Gram-positive bacteria:Corynebacterium glutamicum ATCC 13032(MIC=1.6 µM);Bacillus subtilis ATCC 23857(MIC=1.6 µM);Staphylococcus aureus ATCC 9144(MIC>100µM);
- Gram-negative bacteria:Escherichia coli ATCC 25922(MIC=12.5 µM);Pseudomonas aeruginosa ATCC 27853(MIC=25.0 µM);
- Cancer:Human melanoma A2058(IC50=4.1 μM).
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- [Ref.31940927]Cytotoxicity: Human fibroblasts MRC-5(IC50=7.5 μM).
-
Binding Target
- liposomes
Structure Information
-
Linear/Cyclic
- Cyclic
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- Disulfide bond between Cys7 and Cys31, Cys11 and Cys27, Cys16 and Cys24; the 'Met' at position 5 and 9 is Methionine sulfoxide.
-
Stereochemistry
- L
-
Structure
- Alpha helix,random coil
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP29095.
Physicochemical Information
-
Formula
- C143H248N42O46S8
Absent Amino Acids
- FHRWY
Common Amino Acids
- C
Mass
- 3548.28
PI
- 8.33
Basic Residues
- 4
Acidic Residues
- 2
Hydrophobic Residues
- 10
Net Charge
- +2
-
Boman Index
- -1508
Hydrophobicity
- 0.269
Aliphatic Index
- 67.14
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 375
Absorbance 280nm
- 11.03
Polar Residues
- 14
DRAMP29095

Comments Information
Function
- Antibacterial activity against Gram-positive bacteria and Gram-negative bacteria.
Literature Information
- ·Literature 1
-
Title
-
Pubmed ID
- 31940927
-
Reference
- Mar Drugs. 2020 Jan 12;18(1):51.
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Author
- Hansen IKØ, Isaksson J, Poth AG, Hansen KØ, Andersen AJC, Richard CSM, Blencke HM, Stensvåg K, Craik DJ, Haug T.