General Information
-
DRAMP ID
- DRAMP29140
-
Peptide Name
- Pxt‐2
-
Source
- Xenopus tropicalis
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- FIGALLRPALKLLA
-
Sequence Length
- 14
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial,Anti-Gram+, Anti-Gram-, Antifungal
-
Target Organism
-
- [Ref.25312021]Gram-negative bacteria:Escherichia coli DH5α(MIC=50 µg/ml);
- Gram-positive bacteria:Staphylococcus aureus JCM 2151(MIC=9.7 µg/ml).
- [Ref.26802742]Gram-negative bacteria:Escherichia coli NBRC 14237(MIC<12.5 µM);Pseudomonas aeruginosa NBRC 12582(MIC<50 µM);
- Gram-positive bacteria:Staphylococcus aureus NBRC 12732(MIC<12.5 µM);Micrococcus luteus NBRC 12708(MIC<25 µM);
- Fungi:Saccharomyces cerevisiae NBRC 10217(ND);Candida albicans NBRC 1594(ND).
-
Hemolytic Activity
-
- [Ref.25312021]0.4% Hemolysis against Rat erythrocytes at 20 µM.
- [Ref.26802742]2% Hemolysis against Rat erythrocytes at 50 µM.
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
-
N-terminal Modification
- Free
-
C-terminal Modification
- Amidation
-
Nonterminal Modifications and Unusual Amino Acids
- None
-
Stereochemistry
- L
-
Structure
- Alpha helix,random coil
-
Structure Description
- 3.8%,4.0%,4.9% α-helix were mearsured by CD spectra at 10 °C, 25 °C and 37 °C in 10 mm Tris-HCl (pH 7.2).
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP29140.
Physicochemical Information
-
Formula
- C73H126N18O15
Absent Amino Acids
- CDEHMNQSTVWY
Common Amino Acids
- L
Mass
- 1495.91
PI
- 11
Basic Residues
- 2
Acidic Residues
- 0
Hydrophobic Residues
- 10
Net Charge
- +2
-
Boman Index
- 1840
Hydrophobicity
- 1.521
Aliphatic Index
- 188.57
Half Life
-
- Mammalian:1.1 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 1
DRAMP29140
Comments Information
Function
- showed growth inhibitory effects on both Escherichia coli (Gram-negative) and Staphylococcus aureus (Gram-positive).
Literature Information
- ·Literature 1
-
Title
- Identification of novel peptides from amphibian (Xenopus tropicalis) skin by direct tissue MALDI-MS analysis.
-
Pubmed ID
- 25312021
-
Reference
- FEBS J. 2015 Jan;282(1):102-13.
-
Author
- Shigeri Y, Yasuda A, Hagihara Y, Nishi K, Watanabe K, Imura T, Inagaki H, Haramoto Y, Ito Y, Asashima M.
- ·Literature 2
-
Title
- Physicochemical and biological characterizations of Pxt peptides from amphibian (Xenopus tropicalis) skin.
-
Pubmed ID
- 26802742
-
Reference
- J Biochem. 2016 Jun;159(6):619-29.
-
Author
- Shigeri Y, Horie M, Yoshida T, Hagihara Y, Imura T, Inagaki H, Haramoto Y, Ito Y, Asashima M.