General Information
-
DRAMP ID
- DRAMP00085
-
Peptide Name
- Bacteriocin
-
Source
- Lactococcus sp
-
Family
- Belongs to the class IIa bacteriocin
-
Gene
- Not found
-
Sequence
- TSYGNGVHCNKSKCWIDVSELETYKAGTVSNPKDILWSLKE
-
Sequence Length
- 41
-
UniProt Entry
- P86291
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
-
Target Organism
-
- Gram-positive bacteria: Streptococcus aureus, Bacillus thuringiensis;
- Gram-negative bacteria: Salmonella typhi, Klebsiella sp., Escherichia coli KL16 and Escherichia coli Gj137.
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00085.
Physicochemical Information
-
Formula
- C203H315N53O65S2
Absent Amino Acids
- FMQR
Common Amino Acids
- KS
Mass
- 4602.17
PI
- 6.44
Basic Residues
- 6
Acidic Residues
- 5
Hydrophobic Residues
- 11
Net Charge
- +1
-
Boman Index
- -66.62
Hydrophobicity
- -0.59
Aliphatic Index
- 71.22
Half Life
-
- Mammalian:7.2 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 14105
Absorbance 280nm
- 352.63
Polar Residues
- 18
DRAMP00085
Comments Information
Function
- Has bacteriocin active.
Literature Information
- ·Literature 1
-
Title
- Molecular characterisation of bacteriocin from microflora associated with radish and ginger.
-
Pubmed ID
- PubMed ID is not available
-
Reference
- Submitted (APR-2009) to UniProtKB
-
Author
- Ingale A.G.