General Information
-
DRAMP ID
- DRAMP00306
-
Peptide Name
- Endochitinase 1 (Plant defensin)
-
Source
- Ginkgo biloba (Ginkgo) (Maidenhair tree)
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Family
- Belongs to the glycosyl hydrolase 22 family (Chitinase class I subfamily)
-
Gene
- Not found
-
Sequence
- GPLQLSWNYNYGAAGK
-
Sequence Length
- 16
-
UniProt Entry
- P85343
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00306.
Physicochemical Information
-
Formula
- C80H115N21O23
Absent Amino Acids
- CDEFHIMRTV
Common Amino Acids
- G
Mass
- 1738.92
PI
- 8.5
Basic Residues
- 1
Acidic Residues
- 0
Hydrophobic Residues
- 5
Net Charge
- +1
-
Boman Index
- -9.44
Hydrophobicity
- -0.644
Aliphatic Index
- 61.25
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 8480
Absorbance 280nm
- 565.33
Polar Residues
- 8
DRAMP00306
Comments Information
Function
- Defense against chitin containing fungal pathogens.
Catalytic activity
- Random hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.
Literature Information
- ·Literature 1
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Title
- Analysis of the soluble cell wall proteome of gymnosperms.
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Pubmed ID
- 19157640
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Reference
- J Plant Physiol. 2009 May 15;166(8):831-843.
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Author
- Uzal EN, Gómez-Ros LV, Hernández JA, Pedreño MA, Cuello J, Ros Barceló A.