General Information
-
DRAMP ID
- DRAMP00475
-
Peptide Name
- Defensin-like protein 19 (Protein LCR78; Plant defensin 1.4; Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- PDF1.4
-
Sequence
- TEMMAVEGRICERRSKTWTGFCGNTRGCDSQCKRWERASHGACHAQFPGFACFCYFNC
-
Sequence Length
- 58
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Bridge
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00475.
Physicochemical Information
-
Formula
- C280H418N88O81S10
Absent Amino Acids
- L
Common Amino Acids
- C
Mass
- 6633.54
PI
- 8.5
Basic Residues
- 10
Acidic Residues
- 5
Hydrophobic Residues
- 14
Net Charge
- +5
-
Boman Index
- -132.73
Hydrophobicity
- -0.509
Aliphatic Index
- 20.34
Half Life
-
- Mammalian:7.2 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 12990
Absorbance 280nm
- 227.89
Polar Residues
- 24
DRAMP00475
Comments Information
PTM
- Contains four disulfide bonds 11-58;22-43;28-52;32-54.
Literature Information
- ·Literature 1
-
Title
- Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.
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Pubmed ID
- 11437247
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Reference
- Plant Mol Biol. 2001 May;46(1):17-34.
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Author
- Vanoosthuyse V, Miege C, Dumas C, Cock JM.