General Information
-
DRAMP ID
- DRAMP00489
-
Peptide Name
- Putative defensin-like protein 33 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- QNPRGRKCEDPNGVDQKAKCYIYCNEQGFLGGSCQGYTNHYMCECYVG
-
Sequence Length
- 48
-
UniProt Entry
- Q2V4D6
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
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Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00489.
Physicochemical Information
-
Formula
- C228H341N67O74S7
Absent Amino Acids
- W
Common Amino Acids
- G
Mass
- 5429.04
PI
- 6.72
Basic Residues
- 6
Acidic Residues
- 5
Hydrophobic Residues
- 6
Net Charge
- +1
-
Boman Index
- -105.09
Hydrophobicity
- -0.942
Aliphatic Index
- 30.42
Half Life
-
- Mammalian:0.8 hour
- Yeast:10 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 7825
Absorbance 280nm
- 166.49
Polar Residues
- 24
DRAMP00489
Comments Information
Function
- May have antifungal activity.
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
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Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
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Pubmed ID
- 15955924
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Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
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Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.