General Information
-
DRAMP ID
- DRAMP00508
-
Peptide Name
- Putative defensin-like protein 52 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- VSGPPKCIALCRPGYYERFECFHDCITEGYDDGSCVPGPTTAKCGIITKTTNKICYSFAFE
-
Sequence Length
- 61
-
UniProt Entry
- Q2V433
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
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N-terminal Modification
- Not included yet
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C-terminal Modification
- Not included yet
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Nonterminal Modifications and Unusual Amino Acids
- Not included yet
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Stereochemistry
- Not included yet
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Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00508.
Physicochemical Information
-
Formula
- C296H446N74O90S7
Absent Amino Acids
- MQW
Common Amino Acids
- CGT
Mass
- 6705.66
PI
- 5.63
Basic Residues
- 7
Acidic Residues
- 7
Hydrophobic Residues
- 15
Net Charge
- 0
-
Boman Index
- -73.37
Hydrophobicity
- -0.151
Aliphatic Index
- 52.79
Half Life
-
- Mammalian:100 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 6335
Absorbance 280nm
- 105.58
Polar Residues
- 27
DRAMP00508
Comments Information
PTM
- Problely contains two disulfide bonds.
Caution
- Could be the product of a pseudogene. Lacks 2 of the 4 disulfide bonds, which are conserved features of the family.
Literature Information
- ·Literature 1
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Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
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Pubmed ID
- 15955924
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Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
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Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.