General Information
-
DRAMP ID
- DRAMP00509
-
Peptide Name
- Putative defensin-like protein 53 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- MFSQNICMWRDCFARCSPGYYERFECFHDCITKGYDDGNCVPGPKTGRCCCTR
-
Sequence Length
- 53
-
UniProt Entry
- P0CAY2
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00509.
Physicochemical Information
-
Formula
- C261H386N76O77S11
Absent Amino Acids
- L
Common Amino Acids
- C
Mass
- 6173.06
PI
- 7.48
Basic Residues
- 8
Acidic Residues
- 6
Hydrophobic Residues
- 9
Net Charge
- +2
-
Boman Index
- -121.75
Hydrophobicity
- -0.525
Aliphatic Index
- 22.08
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 10470
Absorbance 280nm
- 201.35
Polar Residues
- 24
DRAMP00509
Comments Information
PTM
- Contains four disulfide bonds (By similarity).
Caution
- Could be the product of a pseudogene. Lacks the signal peptide, which is a conserved features of the family.
Literature Information
- ·Literature 1
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Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
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Pubmed ID
- 15955924
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Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
-
Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.