General Information
-
DRAMP ID
- DRAMP00523
-
Peptide Name
- Defensin-like protein 69 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- YDLFTGIGIDARTVPPTCYESCNATFQNPECNKMCVGLAYKDGSCIYPPPEVDGLPPKRPYFPRCCCNPIILSPPSP
-
Sequence Length
- 77
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00523.
Physicochemical Information
-
Formula
- C375H570N94O110S9
Absent Amino Acids
- HW
Common Amino Acids
- P
Mass
- 8443.75
PI
- 5.05
Basic Residues
- 6
Acidic Residues
- 7
Hydrophobic Residues
- 18
Net Charge
- -1
-
Boman Index
- -85.34
Hydrophobicity
- -0.235
Aliphatic Index
- 60.78
Half Life
-
- Mammalian:2.8 hour
- Yeast:10 min
- E.coli:2 min
Extinction Coefficient Cystines
- 7950
Absorbance 280nm
- 104.61
Polar Residues
- 30
DRAMP00523
Comments Information
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
-
Title
- Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones.
-
Pubmed ID
- 9679202
-
Reference
- DNA Res. 1998 Apr 30;5(2):131-145.
-
Author
- Kaneko T, Kotani H, Nakamura Y, Sato S, Asamizu E, Miyajima N, Tabata S.
- ·Literature 2
-
Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
-
Pubmed ID
- 15955924
-
Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
-
Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.
- ·Literature 3
-
Title
- Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.
-
Pubmed ID
- 17147637
-
Reference
- Plant Biotechnol J. 2006 May;4(3):317-324.
-
Author
- Underwood BA, Vanderhaeghen R, Whitford R, Town CD, Hilson P.