General Information
-
DRAMP ID
- DRAMP00526
-
Peptide Name
- Putative defensin-like protein 72 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- MKLSILVKAMKRNNGFRYDYCIAECSEHFLDDVCKPVCIDKGYSDGGCIGLAPNFKCCCKK
-
Sequence Length
- 61
-
UniProt Entry
- Q2V2S9
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00526.
Physicochemical Information
-
Formula
- C297H472N80O85S10
Absent Amino Acids
- QTW
Common Amino Acids
- CK
Mass
- 6844.1
PI
- 8.44
Basic Residues
- 11
Acidic Residues
- 7
Hydrophobic Residues
- 17
Net Charge
- +4
-
Boman Index
- -81.17
Hydrophobicity
- -0.107
Aliphatic Index
- 70.33
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 4970
Absorbance 280nm
- 82.83
Polar Residues
- 22
DRAMP00526
Comments Information
PTM
- Contains four disulfide bonds (By similarity).
Caution
- Could be the product of a pseudogene. Lacks the signal peptide, which is a conserved features of the family.
Literature Information
- ·Literature 1
-
Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
-
Pubmed ID
- 15955924
-
Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
-
Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.