General Information
-
DRAMP ID
- DRAMP00536
-
Peptide Name
- Putative defensin-like protein 83 (Protein LCR46; Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- LCR46
-
Sequence
- QIITCLPGECTNPSECNAACKSNGYKGGACVSMSIGSTTGACCCKPNFKSQDSFKSNDIIINNN
-
Sequence Length
- 64
-
UniProt Entry
- P82761
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00536.
Physicochemical Information
-
Formula
- C272H439N79O96S9
Absent Amino Acids
- HRW
Common Amino Acids
- CNS
Mass
- 6640.49
PI
- 7.68
Basic Residues
- 5
Acidic Residues
- 4
Hydrophobic Residues
- 14
Net Charge
- +1
-
Boman Index
- -90.72
Hydrophobicity
- -0.258
Aliphatic Index
- 53.44
Half Life
-
- Mammalian:0.8 hour
- Yeast:10 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 1990
Absorbance 280nm
- 31.59
Polar Residues
- 35
DRAMP00536
Comments Information
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
-
Title
- Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence features of the regions of 1,011,550 bp covered by seventeen P1 and TAC clones.
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Pubmed ID
- 10470850
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Reference
- DNA Res. 1999 Jun 30;6(3):183-195.
-
Author
- Kaneko T, Katoh T, Sato S, Nakamura Y, Asamizu E, Kotani H, Miyajima N, Tabata S.
- ·Literature 2
-
Title
- Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.
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Pubmed ID
- 11437247
-
Reference
- Plant Mol Biol. 2001 May;46(1):17-34
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Author
- Vanoosthuyse V, Miege C, Dumas C, Cock JM.