General Information
-
DRAMP ID
- DRAMP00546
-
Peptide Name
- Defensin-like protein 96 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- RQVCDYDKGECNSYEKSSTCIEPCKQLDSKFIGGRCIPVGGITGMGLCVCCRDVQRGAEKESM
-
Sequence Length
- 63
-
Protein Existence
- Transcript level
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00546.
Physicochemical Information
-
Formula
- C283H464N84O95S10
Absent Amino Acids
- HW
Common Amino Acids
- CG
Mass
- 6883.9
PI
- 6.35
Basic Residues
- 9
Acidic Residues
- 9
Hydrophobic Residues
- 12
Net Charge
- 0
-
Boman Index
- -129.11
Hydrophobicity
- -0.422
Aliphatic Index
- 57.14
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 3480
Absorbance 280nm
- 56.13
Polar Residues
- 26
DRAMP00546
Comments Information
Function
- Confers broad-spectrum resistance to pathogens.
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
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Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
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Pubmed ID
- 15955924
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Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
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Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.