General Information
-
DRAMP ID
- DRAMP00555
-
Peptide Name
- Defensin-like protein 106 (Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- Not found
-
Sequence
- HTTIASAPSSGEPTTYATGPALSKHSHDNDGICFVTPACFAPGQYEIGCIVYCHESHYKHYKCVNRSCCCYNTDKNASELK
-
Sequence Length
- 81
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00555.
Physicochemical Information
-
Formula
- C380H570N106O122S8
Absent Amino Acids
- MW
Common Amino Acids
- CSAT
Mass
- 8831.82
PI
- 6.62
Basic Residues
- 12
Acidic Residues
- 7
Hydrophobic Residues
- 18
Net Charge
- +5
-
Boman Index
- -126.95
Hydrophobicity
- -0.468
Aliphatic Index
- 48.27
Half Life
-
- Mammalian:3.5 hour
- Yeast:10 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 9440
Absorbance 280nm
- 118
Polar Residues
- 38
DRAMP00555
Comments Information
Function
- Defense response to fungus.
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
-
Title
- Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.
-
Pubmed ID
- 17147637
-
Reference
- Plant Biotechnol J. 2006 May;4(3):317-324.
-
Author
- Underwood BA, Vanderhaeghen R, Whitford R, Town CD, Hilson P.
- ·Literature 2
-
Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
-
Pubmed ID
- 15955924
-
Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
-
Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.
- ·Literature 3
-
Title
- Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants.
-
Pubmed ID
- 17565583
-
Reference
- Plant J. 2007 Jul;51(2):262-280.
-
Author
- Silverstein KA, Moskal WA Jr, Wu HC, Underwood BA, Graham MA, Town CD, VandenBosch KA.