General Information
-
DRAMP ID
- DRAMP00606
-
Peptide Name
- Defensin-like protein 161 (Protein LCR27; Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- LCR27
-
Sequence
- EECRLTIDKATPCHLSDCRLSCYTGYNGVGECFDDPNVPGPDNCGCRYNC
-
Sequence Length
- 50
-
UniProt Entry
- Q9M0F1
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00606.
Physicochemical Information
-
Formula
- C226H344N66O79S8
Absent Amino Acids
- MQW
Common Amino Acids
- C
Mass
- 5506.09
PI
- 4.45
Basic Residues
- 5
Acidic Residues
- 8
Hydrophobic Residues
- 8
Net Charge
- -3
-
Boman Index
- -113
Hydrophobicity
- -0.594
Aliphatic Index
- 44.8
Half Life
-
- Mammalian:1 hour
- Yeast:30 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 4970
Absorbance 280nm
- 101.43
Polar Residues
- 25
DRAMP00606
![DRAMP00606 chydropathy plot](http://dramp.cpu-bioinfor.org/tmp/all_info_png/pepwindow_DRAMP00606.1.png)
Comments Information
Function
- Defense response to fungus.
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
-
Title
- Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.
-
Pubmed ID
- 11437247
-
Reference
- Plant Mol Biol. 2001 May;46(1):17-34.
-
Author
- Vanoosthuyse V, Miege C, Dumas C, Cock JM.
- ·Literature 2
-
Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
-
Pubmed ID
- 15955924
-
Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
-
Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.