General Information
-
DRAMP ID
- DRAMP00622
-
Peptide Name
- Defensin-like protein 181 (Protein LCR80; Plant defensin 3.1; Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- PDF3.1
-
Sequence
- SICNDRLGLCDGCDQRCKAKHGPSCESKCDGPVGMLLCTCTYECGPTKLCNGGLGNCGESCNEQCCDRNCAQRYNGGHGYCNTLDDFSLCLCKYPC
-
Sequence Length
- 96
-
Protein Existence
- Transcript level
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00622.
Physicochemical Information
-
Formula
- C412H651N127O142S20
Absent Amino Acids
- W
Common Amino Acids
- C
Mass
- 10296.67
PI
- 5.52
Basic Residues
- 11
Acidic Residues
- 11
Hydrophobic Residues
- 14
Net Charge
- 0
-
Boman Index
- -177.24
Hydrophobicity
- -0.441
Aliphatic Index
- 45.73
Half Life
-
- Mammalian:1.9 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 7085
Absorbance 280nm
- 74.58
Polar Residues
- 52
DRAMP00622
Comments Information
Function
- Confers broad-spectrum resistance to pathogens.
PTM
- Contains eight disulfide bonds (By similarity).
Caution
- Contains 8 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
Literature Information
- ·Literature 1
-
Title
- Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.
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Pubmed ID
- 11437247
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Reference
- Plant Mol Biol. 2001 May;46(1):17-34.
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Author
- Vanoosthuyse V, Miege C, Dumas C, Cock JM.
- ·Literature 2
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Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
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Pubmed ID
- 15955924
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Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
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Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.