General Information
-
DRAMP ID
- DRAMP00676
-
Peptide Name
- Putative defensin-like protein 239 (Protein SCRL17; SCR-like protein 17; Plant defensin)
-
Source
- Arabidopsis thaliana (Mouse-ear cress)
-
Family
- Belongs to the DEFL family
-
Gene
- SCRL17
-
Sequence
- GLIRECDYTMEGYGPCGPNGRSLCLDTFWKTPPSPGLSKNLEGCRCEDRGKRPPIFTGLSHTCRCCWSYGGGSDD
-
Sequence Length
- 75
-
UniProt Entry
- P82636
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antifungal
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00676.
Physicochemical Information
-
Formula
- C349H534N102O110S9
Absent Amino Acids
- AQV
Common Amino Acids
- G
Mass
- 8207.24
PI
- 6.72
Basic Residues
- 10
Acidic Residues
- 9
Hydrophobic Residues
- 12
Net Charge
- +1
-
Boman Index
- -154.77
Hydrophobicity
- -0.681
Aliphatic Index
- 41.6
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 15970
Absorbance 280nm
- 215.81
Polar Residues
- 36
DRAMP00676
Comments Information
Function
- May have antifungal activity.
PTM
- Contains four disulfide bonds (By similarity).
Literature Information
- ·Literature 1
-
Title
- Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.
-
Pubmed ID
- 11437247
-
Reference
- Plant Mol Biol. 2001 May;46(1):17-34.
-
Author
- Vanoosthuyse V, Miege C, Dumas C, Cock JM.
- ·Literature 2
-
Title
- Genome organization of more than 300 defensin-like genes in Arabidopsis.
-
Pubmed ID
- 15955924
-
Reference
- Plant Physiol. 2005 Jun;138(2):600-610.
-
Author
- Silverstein KA, Graham MA, Paape TD, VandenBosch KA.