General Information

    • DRAMP ID

    • DRAMP00762

    • Peptide Name

    • Vaby D (Plant defensin)

    • Source

    • Viola abyssinica (Ethiopian highlands)

    • Family

    • Not found

    • Gene

    • Not found

    • Sequence

    • GLPVCGETCFGGTCNTPGCTCDPWPVCTRN

    • Sequence Length

    • 30

    • UniProt Entry

    • No entry found

    • Protein Existence

    • Not found

Activity Information

    • Biological Activity

    • Antimicrobial, Antibacterial, Antifungal, Antiviral

    • Target Organism

    • No MICs found in DRAMP database

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

      • Not included yet

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Not included yet

    • N-terminal Modification

    • Not included yet

    • C-terminal Modification

    • Not included yet

    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet

    • Stereochemistry

    • Not included yet

    • Structure

    • Bridge

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP00762 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

    • There is no predicted structure for DRAMP00762.

Physicochemical Information

    • Formula

    • C127H194N36O42S6

    • Absent Amino Acids

    • AHIKMQSY

    • Common Amino Acids

    • C

    • Mass

    • 3089.51

    • PI

    • 4.37

    • Basic Residues

    • 1

    • Acidic Residues

    • 2

    • Hydrophobic Residues

    • 5

    • Net Charge

    • -1

    • Boman Index

    • -25.89

    • Hydrophobicity

    • -0.043

    • Aliphatic Index

    • 32.33

    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour

    • Extinction Coefficient Cystines

    • 5875

    • Absorbance 280nm

    • 202.59

    • Polar Residues

    • 18

DRAMP00762

DRAMP00762 chydropathy plot

Comments Information

    • PTM

    • Contains three disulfide bonds

Literature Information

  • ·Literature 1

    • Title

    • Cyclotides from an extreme habitat: characterization of cyclic peptides from Viola abyssinica of the Ethiopian highlands.

    • Reference

    • J Nat Prod. 2011 Apr 25;74(4):727-731.

    • Author

    • Yeshak MY, Burman R, Asres K, Göransson U.