General Information
-
DRAMP ID
- DRAMP00873
-
Peptide Name
- Kalata-B17 (Plant defensin)
-
Source
- Oldenlandia affinis
-
Family
- Belongs to the cyclotide family
-
Gene
- Not found
-
Sequence
- GIPCAESCVYIPCTITALLGCKCKDQVCYN
-
Sequence Length
- 30
-
UniProt Entry
- P85135
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Not found
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
-
Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
-
N-terminal Modification
- No specific N-terminal
-
C-terminal Modification
- No specific C-terminal
-
Nonterminal Modifications and Unusual Amino Acids
- Disulfide bonds between Cys4 and Cys21,Cys8 and Cys23,Cys13 and Cys28.
-
Stereochemistry
- L
-
Structure
- Bridge
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP00873.
Physicochemical Information
-
Formula
- C137H222N34O42S6
Absent Amino Acids
- FHMRW
Common Amino Acids
- C
Mass
- 3209.83
PI
- 6.03
Basic Residues
- 2
Acidic Residues
- 2
Hydrophobic Residues
- 9
Net Charge
- 0
-
Boman Index
- -1.77
Hydrophobicity
- 0.583
Aliphatic Index
- 91
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 3355
Absorbance 280nm
- 115.69
Polar Residues
- 14
DRAMP00873
Comments Information
Function
- Probably participates in a plant defense mechanism.
PTM
- Kalata-B16 are cyclic peptides which may contain three disulfide bonds 4-21; 8-23; 13-28.
Literature Information
- ·Literature 1
-
Title
- The cyclotide fingerprint in oldenlandia affinis: elucidation of chemically modified, linear and novel macrocyclic peptides.
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Pubmed ID
- 17534989
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Reference
- Chembiochem. 2007 Jun 18;8(9):1001-1011.
-
Author
- Plan MR, Göransson U, Clark RJ, Daly NL, Colgrave ML, Craik DJ.