General Information
-
DRAMP ID
- DRAMP00886
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Peptide Name
- Cyclotide hyfl-C (Plant defensin)
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Source
- Hybanthus floribundus (Greenviolet)
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Family
- Belongs to the cyclotide family
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Gene
- Not found
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Sequence
- GSPRQCAETCFIGKCYTEELGCTCTAFLCMKN
-
Sequence Length
- 32
-
UniProt Entry
- P84649
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Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Not found
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
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N-terminal Modification
- Not included yet
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C-terminal Modification
- Not included yet
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Nonterminal Modifications and Unusual Amino Acids
- Not included yet
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Stereochemistry
- Not included yet
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Structure
- Bridge
-
Structure Description
- Cyclotides are plant-derived miniproteins that have the unusual features of a head-to-tail cyclized peptide backbone and a knotted arrangement of disulfide bonds.
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP00886.
Physicochemical Information
-
Formula
- C146H231N39O47S7
Absent Amino Acids
- DHVW
Common Amino Acids
- C
Mass
- 3509.09
PI
- 6.19
Basic Residues
- 3
Acidic Residues
- 3
Hydrophobic Residues
- 7
Net Charge
- 0
-
Boman Index
- -35.26
Hydrophobicity
- 0.022
Aliphatic Index
- 42.81
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 1865
Absorbance 280nm
- 60.16
Polar Residues
- 16
DRAMP00886
Comments Information
Function
- Probably participates in a plant defense mechanism.
PTM
- This is is a cyclic peptide which may contain three disulfide bonds 4-21; 8-23; 13-28.
Literature Information
- ·Literature 1
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Title
- A continent of plant defense peptide diversity: cyclotides in Australian Hybanthus (Violaceae).
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Pubmed ID
- 16199617
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Reference
- Plant Cell. 2005 Nov;17(11):3176-3189.
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Author
- Simonsen SM, Sando L, Ireland DC, Colgrave ML, Bharathi R, Göransson U, Craik DJ.