• DRAMP ID

    • DRAMP00958
    • Peptide Name

    • Pp-AMP2 (P. pubescens AMP2; Plant defensin)
    • Source

    • Phyllostachys pubescens (Japanese bamboo shoots)
    • Family

    • Belongs to the thionin family
    • Gene

    • Not found
    • Sequence

    • KSCCRSTTARNIYNGCRVPGTARPVCAKKSGCKIQEAKKCEPPYD
    • Sequence Length

    • 45
    • UniProt Entry

    • No entry found
    • Protein Existence

    • Not found
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
    • Target Organism

      • Gram-negative bacteria: Erwinia carotovora (IC50=20 µg/ml), Agrobacterium radiobacter (IC50=13 µg/ml), Agrobacterium rhizogenes (IC50=15 µg/ml);
      • Gram-positive bacteria: Clavibacter michiganensis (IC50=18 µg/ml), Curtobacterium flaccumfaciens (IC50=20 µg/ml).
      • Fungi: Fusarium oxysporum (IC50=2 µg/ml), Geotrichum candidum (IC50=2 µg/ml).
    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry
    • Cytotoxicity

      • Not included yet
    • Binding Target

    • Chitin-binding
    • Linear/Cyclic

    • Not included yet
    • N-terminal Modification

    • Not included yet
    • C-terminal Modification

    • Not included yet
    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet
    • Stereochemistry

    • Not included yet
    • Structure

    • Bridge
    • Structure Description

    • Not found
    • Helical Wheel Diagram

    • DRAMP00958 helical wheel diagram
    • PDB ID

    • None
    • Predicted Structure

    • There is no predicted structure for DRAMP00958.
    • Formula

    • C204H342N66O63S6
    • Absent Amino Acids

    • FHLMW
    • Common Amino Acids

    • CK
    • Mass

    • 4919.72
    • PI

    • 9.42
    • Basic Residues

    • 10
    • Acidic Residues

    • 3
    • Hydrophobic Residues

    • 8
    • Net Charge

    • +7
    • Boman Index

    • -116.67
    • Hydrophobicity

    • -0.833
    • Aliphatic Index

    • 39.11
    • Half Life

      • Mammalian:1.3 hour
      • Yeast:3 min
      • E.coli:2 min
    • Extinction Coefficient Cystines

    • 3355
    • Absorbance 280nm

    • 76.25
    • Polar Residues

    • 19

DRAMP00958

DRAMP00958 chydropathy plot
    • Comment

    • No comments found on DRAMP database
  • ·Literature 1
    • Title

    • Amino acid sequence and antimicrobial activity of chitin-binding peptides, Pp-AMP 1 and Pp-AMP 2, from Japanese bamboo shoots (Phyllostachys pubescens).
    • Reference

    • Biosci Biotechnol Biochem. 2005 Mar;69(3):642-645.
    • Author

    • Fujimura M, Ideguchi M, Minami Y, Watanabe K, Tadera K.