General Information
-
DRAMP ID
- DRAMP00979
-
Peptide Name
- Antifungal peptide 2 (EAFP2; Plant defensin)
-
Source
- Eucommia ulmoides (Hardy rubber tree)
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Family
- Belongs to the hevein-like family
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Gene
- Not found
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Sequence
- QTCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG
-
Sequence Length
- 41
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UniProt Entry
- P83597
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Protein Existence
- Protein level
Activity Information
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Biological Activity
- Antimicrobial, Antifungal
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Target Organism
-
- Fungi: Phytophthora infestans, Ascochyta lycopersici (IC50=109 µg/ml), Verticillium dahliae, Gibberella zeae, Alternaria nicotianae, Fusarium moniliforme (IC50=18 µg/ml), Fusarium oxysporum (IC50=94 µg/ml) and Colletotrichum gossypii (IC50=56 µg/ml).
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
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Binding Target
- Chitin-binding
Structure Information
-
Linear/Cyclic
- Not included yet
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N-terminal Modification
- Not included yet
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C-terminal Modification
- Not included yet
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Nonterminal Modifications and Unusual Amino Acids
- Not included yet
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Stereochemistry
- Not included yet
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Structure
- Combine helix and strand structure
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Structure Description
- EAFP2 adopts a compact global fold composed of a 3(10) helix (Cys3-Arg6), an alpha-helix (Ala27-Cys31) and a three-stranded antiparallel beta-sheet (Cys16-Ser18, Cys23-Ser25, and Cys35-Cys37) and cross-linked by five disulfide bridges. The tertiary structure of EAFP2 shows a chitin-binding domain.
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Helical Wheel Diagram
-
PDB ID
- 1P9G resolved by X-ray.
- 1P9G-> 
-
Predicted Structure
- There is no predicted structure for DRAMP00979.
Physicochemical Information
-
Formula
- C163H259N57O53S10
Absent Amino Acids
- DEFHKMVW
Common Amino Acids
- C
Mass
- 4185.8
PI
- 8.62
Basic Residues
- 4
Acidic Residues
- 0
Hydrophobic Residues
- 7
Net Charge
- +4
-
Boman Index
- -58.96
Hydrophobicity
- -0.066
Aliphatic Index
- 31.22
Half Life
-
- Mammalian:0.8 hour
- Yeast:10 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5095
Absorbance 280nm
- 127.38
Polar Residues
- 26
DRAMP00979
Comments Information
Function
- Has antifungal activity.
PTM
- Contains five disulfide bonds 3-17; 7-37; 11-23; 16-30; 35-39, and Pyrrolidone carboxylic acid at position 1.
Literature Information
- ·Literature 1
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Title
- Two novel antifungal peptides distinct with a five-disulfide motif from the bark of Eucommia ulmoides Oliv.
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Pubmed ID
- 12067732
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Reference
- FEBS Lett. 2002 Jun 19;521(1-3):87-90.
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Author
- Huang R.-H, Xiang Y, Liu X.-Z, Zhang Y, Hu Z, Wang D.-C.
- ·Literature 2
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Title
- Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Eucommia ulmoides Oliver at an atomic resolution.
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Pubmed ID
- 15363789
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Reference
- J Struct Biol. 2004 Oct;148(1):86-97.
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Author
- Xiang Y, Huang RH, Liu XZ, Zhang Y, Wang DC.
- ·Literature 3
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Title
- Solution structure of Eucommia antifungal peptide: a novel structural model distinct with a five-disulfide motif.
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Pubmed ID
- 15147184
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Reference
- Biochemistry. 2004 May 25;43(20):6005-6012.
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Author
- Huang RH, Xiang Y, Tu GZ, Zhang Y, Wang DC.