General Information

    • DRAMP ID

    • DRAMP01416

    • Peptide Name

    • Nigrocin-2ISc (Frogs, amphibians, animals)

    • Source

    • Odorrana ishikawae (Ishikawa's frog)

    • Family

    • Not found

    • Gene

    • Not found

    • Sequence

    • GILSTVFKAGKGIVCGLSGLC

    • Sequence Length

    • 21

    • UniProt Entry

    • No entry found

    • Protein Existence

    • Homology

Activity Information

    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal

    • Target Organism

      • Gram-negative bacterium: Escherichia coli (MIC=50 µM);
      • Gram-positive bacterium: Staphylococcus aureus (MIC=3 µM).
      • Yeast: Candida albicans (MIC=100 µM).

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

    • No cytotoxicity information found in the reference(s) presented

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Cyclic

    • N-terminal Modification

    • Free

    • C-terminal Modification

    • Cyclization (Cys15 and Cys21)

    • Nonterminal Modifications and Unusual Amino Acids

    • Disulfide bond between Cys15 and Cys21.

    • Stereochemistry

    • L

    • Structure

    • Not found

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP01416 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

Physicochemical Information

    • Formula

    • C90H155N23O25S2

    • Absent Amino Acids

    • DEHMNPQRWY

    • Common Amino Acids

    • G

    • Mass

    • 2023.48

    • PI

    • 8.9

    • Basic Residues

    • 2

    • Acidic Residues

    • 0

    • Hydrophobic Residues

    • 9

    • Net Charge

    • +2

    • Boman Index

    • 24.26

    • Hydrophobicity

    • 1.252

    • Aliphatic Index

    • 125.24

    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour

    • Extinction Coefficient Cystines

    • 125

    • Absorbance 280nm

    • 6.25

    • Polar Residues

    • 10

DRAMP01416

DRAMP01416 chydropathy plot

Comments Information

    • Comment

    • No comments found on DRAMP database

Literature Information

  • ·Literature 1

    • Title

    • Characterization of novel antimicrobial peptides from the skin of the endangered frog Odorrana ishikawae by shotgun cDNA cloning.

    • Reference

    • Biochem Biophys Res Commun. 2011 Sep 9;412(4):673-677.

    • Author

    • Iwakoshi-Ukena E, Soga M, Okada G, Fujii T, Sumida M, Ukena K.