General Information
-
DRAMP ID
- DRAMP01540
-
Peptide Name
- Nigroain-D1 (Frogs, amphibians, animals)
-
Source
- Rana nigrovittata (Black-striped frog)
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- CVHWQTNPARTSCIGP
-
Sequence Length
- 16
-
UniProt Entry
- No entry found
-
Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial
-
Target Organism
- No MICs found in DRAMP database
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP01540.
Physicochemical Information
-
Formula
- C75H116N24O22S2
Absent Amino Acids
- DEFKLMY
Common Amino Acids
- CPT
Mass
- 1770.01
PI
- 8.08
Basic Residues
- 2
Acidic Residues
- 0
Hydrophobic Residues
- 4
Net Charge
- +2
-
Boman Index
- -23.7
Hydrophobicity
- -0.369
Aliphatic Index
- 48.75
Half Life
-
- Mammalian:1.2 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 5625
Absorbance 280nm
- 375
Polar Residues
- 7
DRAMP01540
Comments Information
PTM
- Contains one disulfide bridge.
Literature Information
- ·Literature 1
-
Title
- Peptidomics and genomics analysis of novel antimicrobial peptides from the frog, Rana nigrovitt.
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Pubmed ID
- 19778602
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Reference
- Genomics. 2010 Jan;95(1):66-71.
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Author
- Ma Y, Liu C, Liu X, Wu J, Yang H, Wang Y, Li J, Yu H, Lai R.