General Information
-
DRAMP ID
- DRAMP02051
-
Peptide Name
- Lividin-1 (Brevinin-1-OR2; Frogs, amphibians, animals)
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Source
- Odorrana rotodora (Chinese odorous frog) (Odorrana livida)
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Family
- Belongs to the frog skin active peptide family (Brevinin subfamily)
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Gene
- lividin-1
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Sequence
- ILPFVAGVAAEMMQHVYCAASKKC
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Sequence Length
- 24
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UniProt Entry
- Q2UXR4
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Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- Gram-negative bacteria: Escherichia coli ATCC 25922 (MIC=5.8 µg/ml), Bacillus pyocyaneus CMCCB 10104 (MIC=11.6 µg/ml);
- Gram-positive bacterium: Staphylococcus aureus ATCC 25923 (MIC=11.6 µg/ml).
- Yeast: Candida albicans (MIC=5.8 µg/ml).
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
-
N-terminal Modification
- Free
-
C-terminal Modification
- Cyclization (Cys18 and Cys24)
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Nonterminal Modifications and Unusual Amino Acids
- Disulfide bond between Cys18 and Cys24.
-
Stereochemistry
- L
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Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- Please click DRAMP02051_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C114H183N29O30S4
Absent Amino Acids
- DNRTW
Common Amino Acids
- A
Mass
- 2568.12
PI
- 8.04
Basic Residues
- 3
Acidic Residues
- 1
Hydrophobic Residues
- 11
Net Charge
- +2
-
Boman Index
- 10.54
Hydrophobicity
- 0.808
Aliphatic Index
- 89.58
Half Life
-
- Mammalian:20 hour
- Yeast:30 min
- E.coli:>10 hour
Extinction Coefficient Cystines
- 1615
Absorbance 280nm
- 70.22
Polar Residues
- 5
DRAMP02051
Comments Information
Function
- Amphibian defensive peptide.
Tissue specificity
- Expressed by the skin glands.
PTM
- Contains disulfide bond.
Literature Information
- ·Literature 1
-
Title
- Lividins: novel antimicrobial peptide homologs from the skin secretion of the Chinese Large Odorous frog, Rana (Odorrana) livida. Identification by shotgun cDNA cloning and sequence analysis.
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Pubmed ID
- 16713657
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Reference
- Peptides. 2006 Sep;27(9):2118-2123.
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Author
- Zhou M, Chen T, Walker B, Shaw C.
- ·Literature 2
-
Title
- Extremely abundant antimicrobial peptides existed in the skins of nine kinds of Chinese odorous frogs.
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Pubmed ID
- 22029824
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Reference
- J Proteome Res. 2012 Jan 1;11(1):306-319.
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Author
- Yang X, Lee WH, Zhang Y.