• DRAMP ID

    • DRAMP02288
    • Peptide Name

    • Gaegurin-RN1 (Frogs, amphibians, animals)
    • Source

    • Rana nigrovittata
    • Family

    • Not found
    • Gene

    • Not found
    • Sequence

    • FIGPVLKIAAGILPTAICKIFKKC
    • Sequence Length

    • 24
    • UniProt Entry

    • No entry found
    • Protein Existence

    • Not found
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
    • Target Organism

      • [Ref.19778602]Gram-positive bacteria: Staphylococcus aureus ATCC25923 (MIC=2.34 µg/ml), Staphylococcus aureus ATCC43300 (MIC=9.38 µg/ml), Bacillus subtilis (MIC=4.69 µg/ml);
      • Gram-negative bacterium: Escherichia coli ML-35P (MIC=18.75 µg/ml);
      • Yeast: Candida albicans ATCC2002 (MIC=4.69 µg/ml)
    • Hemolytic Activity

      • [Ref.19778602] It has 46.13 ± 1.49% hemolytic activity at 100 μg/ml against rabbit red blood cells
    • Cytotoxicity

    • No cytotoxicity information found in the reference(s) presented
    • Binding Target

    • Not found
    • Linear/Cyclic

    • Cyclic
    • N-terminal Modification

    • Free
    • C-terminal Modification

    • Cyclization (Cys18 and Cys24)
    • Nonterminal Modifications and Unusual Amino Acids

    • Disulfide bond between Cys18 and Cys24.
    • Stereochemistry

    • L
    • Structure

    • Not found
    • Structure Description

    • Not found
    • Helical Wheel Diagram

    • DRAMP02288 helical wheel diagram
    • PDB ID

    • None
    • Predicted Structure

    • Formula

    • C122H206N28O26S2
    • Absent Amino Acids

    • DEHMNQRSWY
    • Common Amino Acids

    • I
    • Mass

    • 2545.27
    • PI

    • 9.7
    • Basic Residues

    • 4
    • Acidic Residues

    • 0
    • Hydrophobic Residues

    • 13
    • Net Charge

    • +4
    • Boman Index

    • 29.54
    • Hydrophobicity

    • 1.25
    • Aliphatic Index

    • 138.33
    • Half Life

      • Mammalian:1.1 hour
      • Yeast:3 min
      • E.coli:2 min
    • Extinction Coefficient Cystines

    • 125
    • Absorbance 280nm

    • 5.43
    • Polar Residues

    • 5

DRAMP02288

DRAMP02288 chydropathy plot
    • Function

    • Has hemolytic activity against rabbit red cells..
  • ·Literature 1
    • Title

    • Peptidomics and genomics analysis of novel antimicrobial peptides from the frog, Rana nigrovittata.
    • Reference

    • Genomics. 2010 Jan;95(1):66-71.
    • Author

    • Ma Y, Liu C, Liu X, Wu J, Yang H, Wang Y, Li J, Yu H, Lai R.