General Information
-
DRAMP ID
- DRAMP02292
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Peptide Name
- Gaegurin-2 (Gaegurin 2; GGN2; Frogs, amphibians, animals)
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Source
- Glandirana rugosa (Japanese wrinkled frog) (Rana rugosa)
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Family
- Belongs to the frog skin active peptide family (Brevinin subfamily)
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Gene
- GGN2
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Sequence
- GIMSIVKDVAKNAAKEAAKGALSTLSCKLAKTC
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Sequence Length
- 33
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UniProt Entry
- P80396
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Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- Gram-positive bacteria: Micrococcus luteus (MIC=2.5 µg/ml), Staphylococcus epidermidis (MIC=10 µg/ml), Bacillus subtilis (MIC=10 µg/ml);
- Gram-negative bacteria: Klebsiella pneumoniae (MIC=25 µg/ml), Shigella dysentariae (MIC=25 µg/ml), Pseudomonas putida (MIC=50 µg/ml), Pseudomonas aeruginosa (MIC=50 µg/ml), Eshchericia coli (MIC=75 µg/ml).
- Fungi: Saccharomyces cerevisiae (MIC=150 µg/ml), Candida albicans (MIC=150 µg/ml), Salmonella typhimurium (MIC=150 µg/ml), Proteus mirabilis (MIC>200 µg/ml), Serratia marcescens (MIC>200 µg/ml).
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Hemolytic Activity
-
- [Ref.7999137] It has 0.19% hemolytic activity at 0.1 μg/ml, 0.16% hemolytic activity at 1 μg/ml, 0.31% hemolytic activity at 10 μg/ml, 0.82% hemolytic activity at 100 μg/ml against human red blood cells.
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
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N-terminal Modification
- Free
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C-terminal Modification
- Cyclization (Cys27 and Cys33)
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Nonterminal Modifications and Unusual Amino Acids
- Disulfide bond between Cys27 and Cys33.
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Stereochemistry
- L
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Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP02292.
Physicochemical Information
-
Formula
- C142H254N40O44S3
Absent Amino Acids
- FHPQRWY
Common Amino Acids
- A
Mass
- 3322
PI
- 9.51
Basic Residues
- 6
Acidic Residues
- 2
Hydrophobic Residues
- 14
Net Charge
- +4
-
Boman Index
- -18.67
Hydrophobicity
- 0.297
Aliphatic Index
- 97.88
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 125
Absorbance 280nm
- 3.91
Polar Residues
- 10
DRAMP02292
Comments Information
Comment
- No comments found on DRAMP database
Literature Information
- ·Literature 1
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Title
- Antimicrobial peptides from the skin of a Korean frog, Rana rugosa.
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Pubmed ID
- 7999137
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Reference
- Biochem Biophys Res Commun. 1994 Nov 30;205(1):948-954.
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Author
- Park JM, Jung JE, Lee BJ.