• DRAMP ID

    • DRAMP02293
    • Peptide Name

    • Gaegurin-3 (Gaegurin 3; GGN3; Frogs, amphibians, animals)
    • Source

    • Glandirana rugosa (Japanese wrinkled frog) (Rana rugosa)
    • Family

    • Belongs to the frog skin active peptide family (Brevinin subfamily)
    • Gene

    • GGN3
    • Sequence

    • GIMSIVKDVAKTAAKEAAKGALSTLSCKLAKTC
    • Sequence Length

    • 33
    • Protein Existence

    • Protein level
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
    • Target Organism

      • Gram-positive bacteria: Micrococcus luteus (MIC=2.5 µg/ml), Staphylococcus epidermidis (MIC=10 µg/ml), Bacillus subtilis (MIC=10 µg/ml);
      • Gram-negative bacteria: Klebsiella pneumoniae (MIC=25 µg/ml), Shigella dysentariae (MIC=25 µg/ml), Pseudomonas putida (MIC=50 µg/ml), Pseudomonas aeruginosa (MIC=50 µg/ml), Eshchericia coli (MIC=75 µg/ml).
      • Fungi: Saccharomyces cerevisiae (MIC>200 µg/ml), Candida albicans (MIC>200 µg/ml), Salmonella typhimurium (MIC=150 µg/ml), Proteus mirabilis (MIC>200 µg/ml), Serratia marcescens (MIC>200 µg/ml).
    • Hemolytic Activity

      • [Ref.7999137] It has 0.11% hemolytic activity at 0.1 μg/ml, 0.12% hemolytic activity at 1 μg/ml, 0.35% hemolytic activity at 10 μg/ml, 1.20% hemolytic activity at 100 μg/ml against human red blood cells.
    • Cytotoxicity

    • No cytotoxicity information found in the reference(s) presented
    • Binding Target

    • Not found
    • Linear/Cyclic

    • Cyclic
    • N-terminal Modification

    • Free
    • C-terminal Modification

    • Cyclization (Cys27 and Cys33)
    • Nonterminal Modifications and Unusual Amino Acids

    • Disulfide bond between Cys27 and Cys33.
    • Stereochemistry

    • L
    • Structure

    • Not found
    • Structure Description

    • Not found
    • Helical Wheel Diagram

    • DRAMP02293 helical wheel diagram
    • PDB ID

    • None
    • Predicted Structure

    • There is no predicted structure for DRAMP02293.
    • Formula

    • C142H255N39O44S3
    • Absent Amino Acids

    • FHNPQRWY
    • Common Amino Acids

    • A
    • Mass

    • 3309
    • PI

    • 9.51
    • Basic Residues

    • 6
    • Acidic Residues

    • 2
    • Hydrophobic Residues

    • 14
    • Net Charge

    • +4
    • Boman Index

    • -14.6
    • Hydrophobicity

    • 0.382
    • Aliphatic Index

    • 97.88
    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour
    • Extinction Coefficient Cystines

    • 125
    • Absorbance 280nm

    • 3.91
    • Polar Residues

    • 10

DRAMP02293

DRAMP02293 chydropathy plot
    • Comment

    • No comments found on DRAMP database
  • ·Literature 1
    • Title

    • Antimicrobial peptides from the skin of a Korean frog, Rana rugosa.
    • Reference

    • Biochem Biophys Res Commun. 1994 Nov 30;205(1):948-954.
    • Author

    • Park JM, Jung JE, Lee BJ.