General Information

    • DRAMP ID

    • DRAMP02343

    • Peptide Name

    • Salmocidin-3 (fish, chordates, animals)

    • Source

    • Oncorhynchus mykiss (Rainbow trout)

    • Family

    • Not found

    • Gene

    • Not found

    • Sequence

    • XXPQQLGHVKAAXSDY

    • Sequence Length

    • 16

    • Protein Existence

    • Protein level

Activity Information

    • Biological Activity

    • Antimicrobial, Antibacterial

    • Target Organism

    • No MICs found in DRAMP database

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

      • Not included yet

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Not included yet

    • N-terminal Modification

    • Not included yet

    • C-terminal Modification

    • Not included yet

    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet

    • Stereochemistry

    • Not included yet

    • Structure

    • Not found

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP02343 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

    • There is no predicted structure for DRAMP02343.

Physicochemical Information

    • Formula

    • C62H90N18O17

    • Absent Amino Acids

    • CEFIMNRTW

    • Common Amino Acids

    • X

    • Mass

    • 1747.54

    • PI

    • 6.74

    • Basic Residues

    • 2

    • Acidic Residues

    • 1

    • Hydrophobic Residues

    • 4

    • Net Charge

    • +1

    • Boman Index

    • -20.03

    • Hydrophobicity

    • -0.631

    • Aliphatic Index

    • 55

    • Half Life

      • Mammalian:?
      • Yeast:?
      • E.coli:?

    • Extinction Coefficient Cystines

    • 1490

    • Absorbance 280nm

    • 99.33

    • Polar Residues

    • 3

DRAMP02343

Comments Information

    • Comment

    • No comments found on DRAMP database

Literature Information

  • ·Literature 1

    • Title

    • Purification and partial characterization of antibacterial peptides from rainbow trout, Oncorhynchus mykiss.

    • Reference

    • Submitted (DEC-1999) to UniProtKB.

    • Author

    • Henry M.A, Secombes C.J.