General Information
-
DRAMP ID
- DRAMP02398
-
Peptide Name
- Antimicrobial peptide GP-19 (GP-19)
-
Source
- Xenorhabdus budapestensis
-
Family
- Not found
-
Gene
- Not found
-
Sequence
- GPVGLLSSPGSLPPVGGAP
-
Sequence Length
- 19
-
UniProt Entry
- B3A0L2
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
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Target Organism
-
- Gram-positive bacteria: Bacillus subtilis (IZ=19.04±0.2 mm), Bacillus megaterium (IZ=7.3±0.28 mm), Prototheca wickerhamii (IZ=10.3±0.33 mm);
- Gram-negative bacteria: Xanthomonas campestris pv. vesicatoria (IZ=16.47±0.35 mm), Pseudomonas solanacearum (IZ=10.75±0.41 mm).
- fungi: Phytophthora capsici (CD=16.62±1.07 mm), Verticillium dahlia (EC50=17.54 µg/ml), Fusarium graminearum (CD=12.04±0.87 mm), Fusarium omysporum (CD=21.64±0.4 mm).
- NOTE: IZ = Inhibition Zone and CD = Colony diameter.
-
Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
-
Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
-
N-terminal Modification
- Not included yet
-
C-terminal Modification
- Not included yet
-
Nonterminal Modifications and Unusual Amino Acids
- Not included yet
-
Stereochemistry
- Not included yet
-
Structure
- Not found
-
Structure Description
- Not found
-
Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- There is no predicted structure for DRAMP02398.
Physicochemical Information
-
Formula
- C75H123N19O23
Absent Amino Acids
- CDEFHIKMNQRTWY
Common Amino Acids
- GP
Mass
- 1658.92
PI
- 5.52
Basic Residues
- 0
Acidic Residues
- 0
Hydrophobic Residues
- 6
Net Charge
- 0
-
Boman Index
- 19.15
Hydrophobicity
- 0.484
Aliphatic Index
- 97.37
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 8
DRAMP02398
Comments Information
Function
- GP-19 displays broad-spectrum antimicrobial activity against the tested bacteria and fungi.
Literature Information
- ·Literature 1
-
Title
- Two novel antimicrobial peptides purified from the symbiotic bacteria Xenorhabdus budapestensis NMC-10.
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Pubmed ID
- 22497806
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Reference
- Peptides. 2012 Jun;35(2):253-260.
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Author
- Xiao Y, Meng F, Qiu D, Yang X.