• DRAMP ID

    • DRAMP02407
    • Peptide Name

    • Napin-like polypeptide (Contains: Napin-like polypeptide small chain and large chain)
    • Source

    • Brassica oleracea var. alboglabra (Chinese kale) (Brassicaalboglabra)
    • Family

    • Belongs to the 2S seed storage albumins family
    • Gene

    • Not found
    • Sequence

    • PAQPFRIKKRQGPFERP
    • Sequence Length

    • 17
    • Protein Existence

    • Protein level
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
    • Target Organism

      • Gram-negative bacterium: Pseudomonas fluorescens (IC50=89±6.1 µM);
      • Gram-positive bacteria: Bacillus subtilis (IC50=278±12.9 µM), B. cereus (IC50=145±83 µM), Bacillus megaterium (IC50=156±8.4 µM), Megabacterium phlei (IC50=104±27 µM).
    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry
    • Cytotoxicity

      • Not included yet
    • Binding Target

    • Not found
    • Linear/Cyclic

    • Not included yet
    • N-terminal Modification

    • Not included yet
    • C-terminal Modification

    • Not included yet
    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet
    • Stereochemistry

    • Not included yet
    • Structure

    • Not found
    • Structure Description

    • Not found
    • Helical Wheel Diagram

    • DRAMP02407 helical wheel diagram
    • PDB ID

    • None
    • Predicted Structure

    • There is no predicted structure for DRAMP02407.
    • Formula

    • C94H150N30O22
    • Absent Amino Acids

    • CDHLMNSTVWY
    • Common Amino Acids

    • P
    • Mass

    • 2052.41
    • PI

    • 11.72
    • Basic Residues

    • 5
    • Acidic Residues

    • 1
    • Hydrophobic Residues

    • 4
    • Net Charge

    • +4
    • Boman Index

    • -60.12
    • Hydrophobicity

    • -1.571
    • Aliphatic Index

    • 28.82
    • Half Life

      • Mammalian:>20 hour
      • Yeast:>20 hour
      • E.coli:?
    • Extinction Coefficient Cystines

    • 0
    • Absorbance 280nm

    • 0
    • Polar Residues

    • 1

DRAMP02407

    • Function

    • Inhibits cell-free protein synthesis. Inhibits trypsin and chymotrypsin. Does not inhibit ribonuclease of protease activity. Has antibacterial activity except Gram-positive bacterium S. aureus or the Gram-negative bacteria E. coli, E. aerogenes, P. aeruginosa and P. vulgaris. Inhibits the proliferation of leukemia cells in vitro.
    • Subunit structure

    • The mature protein consists of a small and a large chain linked by disulfide bonds (sequence shown is small chain).
    • Biophysicochemical properties

    • This activity is preserved between pH 5 and pH 11, and between 10 and 40 degrees C. It falls to a low level at pH 3 and pH 13 and at 70 degrees C.
  • ·Literature 1
    • Title

    • A napin-like polypeptide with translation-inhibitory, trypsin-inhibitory, antiproliferative and antibacterial activities from kale seeds.
    • Reference

    • J Pept Res. 2004 Nov;64(5):202-208.
    • Author

    • A napin-like polypeptide with translation-inhibitory, trypsin-inhibitory, antiproliferative and antibacterial activities from kale seeds.