• DRAMP ID

    • DRAMP02642
    • Peptide Name

    • Rhesus theta-defensin 1 (RTD-1; primates, mammals, animals)
    • Source

    • Macaca mulatta (Rhesus macaque)
    • Family

    • Belongs to the alpha-defensin family (Theta subfamily)
    • Gene

    • Not found
    • Sequence

    • GFCRCLCRRGVCRCICTR
    • Sequence Length

    • 18
    • Protein Existence

    • Protein level
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal, Antiviral
    • Target Organism

      • Gram-positive bacteria: Staphylococcus aureus 502a and Listeria monocytogenes;
      • Gram-negative bacteria: Salmonella typhimurium, Escherichia coli ML35.
      • Fungi: Candida albicans 16820, Cryptococcus neoformans 271A (the activity of RTD-2 against Escherichia coli ML35 was 2-3-fold less than those of RTD-1 and RTD-3).
    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry
    • Cytotoxicity

    • No cytotoxicity information found in the reference(s) presented
    • Binding Target

    • Not found
    • Linear/Cyclic

    • Cyclic
    • N-terminal Modification

    • No specific N-terminal
    • C-terminal Modification

    • No specific C-terminal
    • Nonterminal Modifications and Unusual Amino Acids

    • Disulfide bonds between Cys3 and Cys16,Cys5 and Cys14,Cys7 and Cys12.
    • Stereochemistry

    • L
    • Structure

    • Beta strand (4 strands; 10 residues)
    • Structure Description

    • Not found
    • Helical Wheel Diagram

    • DRAMP02642 helical wheel diagram
    • PDB ID

    • 1HVZ resolved by NMR.
    • Predicted Structure

    • There is no predicted structure for DRAMP02642.
    • Formula

    • C82H145N33O20S6
    • Absent Amino Acids

    • ADEHKMNPQSWY
    • Common Amino Acids

    • C
    • Mass

    • 2105.62
    • PI

    • 9.3
    • Basic Residues

    • 5
    • Acidic Residues

    • 0
    • Hydrophobic Residues

    • 4
    • Net Charge

    • +5
    • Boman Index

    • -50.75
    • Hydrophobicity

    • 0.35
    • Aliphatic Index

    • 59.44
    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour
    • Extinction Coefficient Cystines

    • 375
    • Absorbance 280nm

    • 22.06
    • Polar Residues

    • 9

DRAMP02642

DRAMP02642 chydropathy plot
    • Function

    • RTD-1 and RTD-2 have similar antimicrobial activities against the Gram-positive bacteria S. aureus 502A and L. monocytogenes, the Gram-negative bacterium S. typhimurium, and the fungi C. albicans 16820 and C. neoformans 271A. RTD-2 is 2-3-fold less active than RTD-1 against E. coli ML35.
    • Subunit structure

    • RTD-1 is a cyclic heterodimer composed of subunits A and B; disulfide-linked.
    • Tissue specificity

    • RTD-1 is expressed in bone marrow. Detected in promyelocytes, myelocytes and mature neutrophils and monocytes.
    • Developmental stage

    • RTD-1 expression begins early during granulocyte myelopoiesis.
    • PTM

    • Forms a cyclic peptide with 1 subunit B (RTD-2) or with 1 subunit A (RTD-1). An additional intersubunit disulfide bond is formed.
    • Miscellaneous

    • RTD-1 is 10-fold more present in cells than RTD-2.
  • ·Literature 1
    • Title

    • A cyclic antimicrobial peptide produced in primate leukocytes by the ligation of two truncated alpha-defensins.
    • Reference

    • Science. 1999 Oct 15;286(5439):498-502.
    • Author

    • Tang YQ, Yuan J, Osapay G, Osapay K, Tran D, Miller CJ, Ouellette AJ, Selsted ME.
  • ·Literature 2
    • Title

    • Circular minidefensins and posttranslational generation of molecular diversity.
    • Reference

    • J Leukoc Biol. 2001 Sep;70(3):461-464.
    • Author

    • Leonova L, Kokryakov VN, Aleshina G, Hong T, Nguyen T, Zhao C, Waring AJ, Lehrer RI.
  • ·Literature 3
    • Title

    • Homodimeric theta-defensins from rhesus macaque leukocytes: isolation, synthesis, antimicrobial activities, and bacterial binding properties of the cyclic peptides.
    • Reference

    • J Biol Chem. 2002 Feb 1;277(5):3079-3084.
    • Author

    • Tran D, Tran PA, Tang YQ, Yuan J, Cole T, Selsted ME.