• DRAMP ID

    • DRAMP03104
    • Peptide Name

    • Sapecin (defensins; Insects, animals)
    • Source

    • Sarcophaga peregrina (Flesh fly)
    • Family

    • Belongs to the invertebrate defensin family (Type 1 subfamily)
    • Gene

    • Not found
    • Sequence

    • ATCDLLSGTGINHSACAAHCLLRGNRGGYCNGKAVCVCRN
    • Sequence Length

    • 40
    • Protein Existence

    • Protein level
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
    • Target Organism

      • Gram-positive bacteria: Staphylococcus aureus FDA209P (MIC=5.0 µg/ml), Staphylococcus smith (MIC=5.0 µg/ml), Micrococcus luteus FDA16 (MIC=1.2 µg/ml), Micrococcus luteus IF03333 (MIC=1.2 µg/ml), Micrococcus luteus PC11001 (MIC=10.0 µg/ml), Bacillus subtilis NRRI B-558 (MIC=39.0 µg/ml), Bacillus subtilis PC1219 (MIC=20.0 µg/ml), Mycobacterium smegmatis ATCC607 (MIC=78.0 µg/ml), Corynebacterium bouis 1810 (MIC=2.5 µg/ml), Corynebacterium michiganense (MIC=2.5 µg/ml).
      • Gram-negative bacteria: Xantbmonas oryzae (MIC=20.0 µg/ml), Pseudomonas lachrymans (MIC=78.0 µg/ml), Escherichia coli NIHJ (MIC>78.0 µg/ml), Shigella sonnei JS11746 (MIC>78.0 µg/ml), Proteus vulgaris O X19 (MIC>78.0 µg/ml)
    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry
    • Cytotoxicity

    • No cytotoxicity information found in the reference(s) presented
    • Binding Target

    • Not found
    • Linear/Cyclic

    • Cyclic
    • N-terminal Modification

    • Free
    • C-terminal Modification

    • Free
    • Nonterminal Modifications and Unusual Amino Acids

    • Disulfide bonds between Cys3 and Cys30; Cys16 and Cys36; Cys20 and Cys38.
    • Stereochemistry

    • L
    • Structure

    • Combine helix and strand structure
    • Structure Description

    • Not found
    • Helical Wheel Diagram

    • DRAMP03104 helical wheel diagram
    • PDB ID

    • 1L4V resolved by NMR.
  • 1L4V-> 
    • Predicted Structure

    • There is no predicted structure for DRAMP03104.
    • Formula

    • C164H272N58O52S6
    • Absent Amino Acids

    • EFMPQW
    • Common Amino Acids

    • CG
    • Mass

    • 4080.68
    • PI

    • 8.69
    • Basic Residues

    • 6
    • Acidic Residues

    • 1
    • Hydrophobic Residues

    • 12
    • Net Charge

    • +5
    • Boman Index

    • -51.94
    • Hydrophobicity

    • 0.103
    • Aliphatic Index

    • 75.75
    • Half Life

      • Mammalian:4.4 hour
      • Yeast:>20 hour
      • E.coli:>10 hour
    • Extinction Coefficient Cystines

    • 1865
    • Absorbance 280nm

    • 47.82
    • Polar Residues

    • 21

DRAMP03104

DRAMP03104 chydropathy plot
    • Function

    • Sapecins, which are potent bactericidal proteins, are produced in response to injury. Sapecin is cytotoxic to Gram-positive bacteria, and to a lesser extent against Gram-negative bacteria.
    • Tissue specificity

    • Hemocytes and fat body. Induction
    • PTM

    • Contains three disulfide bonds 3-30; 16-36; 20-38.
  • ·Literature 1
    • Title

    • Molecular cloning of cDNA for sapecin and unique expression of the sapecin gene during the development of Sarcophaga peregrina.
    • Reference

    • J Biol Chem. 1988 Nov 15;263(32):17117-17121.
    • Author

    • Matsuyama K, Natori S.
  • ·Literature 2
    • Title

    • Purification of three antibacterial proteins from the culture medium of NIH-Sape-4, an embryonic cell line of Sarcophaga peregrina.
    • Reference

    • J Biol Chem. 1988 Nov 15;263(32):17112-17116.
    • Author

    • Matsuyama K, Natori S.
  • ·Literature 3
    • Title

    • Determination of the disulfide array in sapecin, an antibacterial peptide of Sarcophaga peregrina (flesh fly).
    • Reference

    • J Biochem. 1990 Apr;107(4):514-518.
    • Author

    • Kuzuhara T, Nakajima Y, Matsuyama K, Natori S.