General Information
-
DRAMP ID
- DRAMP03190
-
Peptide Name
- PobRL-37 (cathelicidin; primates, mammals, animals)
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Source
- Cercopithecidae
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Family
- Not found
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Gene
- Not found
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Sequence
- RLGNFFRKAKKKIGRGLKKIGQKIKDFLGNLVPRTES
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Sequence Length
- 37
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UniProt Entry
- No entry found
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Protein Existence
- Not found
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Antifungal
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Target Organism
-
- In 20% TSB in SPB medium: Escherichia coli (MIC=0.5 µM), Pseudomonas aeruginosa (MIC=0.5-1 µM), Staphylococcus aureus (MIC=2 µM), Enterococcus faecalis (MIC=2-4 µM).
- In 20% SAB in SPB: Candida albicans (MIC=8-16 µM). In 5% TSB in SPB: Escherichia coli (MIC=0.5 µM). In 5% SAB in SPB: Candida albicans (MIC=4-8 µM).
- In 20% TSB in PIL: Escherichia coli (MIC=1 µM), Pseudomonas aeruginosa (MIC=1-2 µM); Staphylococcus aureus (MIC=0.5 µM), Enterococcus faecalis (MIC=1-2 µM).
- In 20% SAB in PIL: Candida albicans (MIC=16 µM).
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Linear
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N-terminal Modification
- Free
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C-terminal Modification
- Free
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Nonterminal Modifications and Unusual Amino Acids
- Free
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Stereochemistry
- L
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Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- Please click DRAMP03190_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C193H330N60O47
Absent Amino Acids
- CHMWY
Common Amino Acids
- K
Mass
- 4243.12
PI
- 11.62
Basic Residues
- 12
Acidic Residues
- 2
Hydrophobic Residues
- 12
Net Charge
- +10
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Boman Index
- -90.47
Hydrophobicity
- -0.776
Aliphatic Index
- 84.32
Half Life
-
- Mammalian:1 hour
- Yeast:2 min
- E.coli:2 min
Extinction Coefficient Cystines
- 0
Absorbance 280nm
- 0
Polar Residues
- 9
DRAMP03190
Comments Information
Function
- Has antibacterial activity.
Literature Information
- ·Literature 1
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Title
- Evolution of the primate cathelicidin. Correlation between structural variations and antimicrobial activity.
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Pubmed ID
- 16720578
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Reference
- J Biol Chem. 2006 Jul 21;281(29):19861-19871.
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Author
- Zelezetsky I, Pontillo A, Puzzi L, Antcheva N, Segat L, Pacor S, Crovella S, Tossi A.