• DRAMP ID

    • DRAMP03227
    • Peptide Name

    • M-zodatoxin-Lt2a (M-ZDTX-Lt2a; Latarcin-2a, Ltc-2a, Ltc2a; spiders, Arthropods, animals)
    • Source

    • Lachesana tarabaevi (Spider)
    • Family

    • Belongs to the latarcin family
    • Gene

    • Not found
    • Sequence

    • GLFGKLIKKFGRKAISYAVKKARGKH
    • Sequence Length

    • 26
    • Protein Existence

    • Protein level
    • Biological Activity

    • Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-, Antifungal
    • Target Organism

      • [Ref.16735513]Gram-positive bacteria: Arthrobacter globiformis VKM Ac-1112 (MIC=0.7 µM), Bacillus subtilis VKM B-501 (MIC=0.4 µM);
      • Gram-negative bacteria: Escherichia coli DH5-alpha (MIC=1.0 µM), Escherichia coli MH1 (MIC=0.7 µM), Pseudomonas aeruginosa PAO1 (MIC=6.7 µM);
      • Fungi: Pichia pastoris GS115 (MIC=6.7 µM), Saccharomyces cerevisiae Y190 (MIC=54 µM).
    • Hemolytic Activity

      • [Ref.16735513]20% hemolytic activity at 6 μM against rabbit erythrocytes
    • Cytotoxicity

      • Not included yet
    • Binding Target

    • Not found
    • Linear/Cyclic

    • Linear
    • N-terminal Modification

    • Free
    • C-terminal Modification

    • Free
    • Nonterminal Modifications and Unusual Amino Acids

    • Free
    • Stereochemistry

    • L
    • Structure

    • Alpha helix (2 helices; 18 residues)
    • Structure Description

    • The molecule of Ltc2a is found to consist of two helical regions (residues 3-9 and 13-21) connected via a poorly ordered fragment.
    • Helical Wheel Diagram

    • DRAMP03227 helical wheel diagram
    • PDB ID

    • 2G9P resolved by NMR.
  • 2G9P-> 
    • Predicted Structure

    • Formula

    • C136H229N41O29
    • Absent Amino Acids

    • CDEMNPQTW
    • Common Amino Acids

    • K
    • Mass

    • 2902.57
    • PI

    • 11.33
    • Basic Residues

    • 10
    • Acidic Residues

    • 0
    • Hydrophobic Residues

    • 10
    • Net Charge

    • +10
    • Boman Index

    • -38.02
    • Hydrophobicity

    • -0.439
    • Aliphatic Index

    • 82.69
    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour
    • Extinction Coefficient Cystines

    • 1490
    • Absorbance 280nm

    • 59.6
    • Polar Residues

    • 6

DRAMP03227

DRAMP03227 chydropathy plot
    • Function

    • Has hemolytic activity against Rabbit erythrocytes and has toxicity to ovarian insect Sf9 cells (EC50=20 µM). Causes paralysis, but is not lethal when injected into insect (Musca domestica) larvae.
  • ·Literature 1
    • Title

    • Latarcins, antimicrobial and cytolytic peptides from the venom of the spider Lachesana tarabaevi (Zodariidae) that exemplify biomolecular diversity.
    • Reference

    • J Biol Chem. 2006 Jul 28;281(30):20983-20992.
    • Author

    • Kozlov SA, Vassilevski AA, Feofanov AV, Surovoy AY, Karpunin DV, Grishin EV.
  • ·Literature 2
    • Title

    • Spatial structure and activity mechanism of a novel spider antimicrobial peptide.
    • Reference

    • Biochemistry. 2006 Sep 5;45(35):10759-10767.
    • Author

    • Dubovskii PV, Volynsky PE, Polyansky AA, Chupin VV, Efremov RG, Arseniev AS.