General Information
-
DRAMP ID
- DRAMP03285
-
Peptide Name
- Ostricacin-1 (Beta-defensin 2; Birds, animals)
-
Source
- Struthio camelus (Ostrich)
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Family
- Belongs to the beta-defensin family
-
Gene
- Not found
-
Sequence
- LFCRKGTCHFGGCPAHLVKVGSCFGFRACCKWPWDV
-
Sequence Length
- 36
-
UniProt Entry
- P85113
-
Protein Existence
- Protein level
Activity Information
-
Biological Activity
- Antimicrobial, Antibacterial, Anti-Gram+, Anti-Gram-
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Target Organism
-
- Gram-positive bacteria: Staphylococcus aureus 1056-MRSA (MIC=1.25 µg/ml), S. aureus NCTC 4163 (MIC=6.7 µg/ml);
- Gram-negative bacteria: Escherichia coli O157:H7 (MIC=0.96 µg/ml), E. coli 0111 (MIC=6.7 µg/ml).
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
- No cytotoxicity information found in the reference(s) presented
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Cyclic
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N-terminal Modification
- Free
-
C-terminal Modification
- Free
-
Nonterminal Modifications and Unusual Amino Acids
- Disulfide bonds between Cys3 and Cys29,Cys8 and Cys23,Cys13 and Cys30.
-
Stereochemistry
- L
-
Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
-
Predicted Structure
- Please click DRAMP03285_predicted_structure.pdb to download.
Physicochemical Information
-
Formula
- C182H267N51O41S6
Absent Amino Acids
- EIMNQY
Common Amino Acids
- C
Mass
- 4017.8
PI
- 8.94
Basic Residues
- 7
Acidic Residues
- 1
Hydrophobic Residues
- 13
Net Charge
- +6
-
Boman Index
- -15.96
Hydrophobicity
- 0.303
Aliphatic Index
- 51.39
Half Life
-
- Mammalian:5.5 hour
- Yeast:3 min
- E.coli:2 min
Extinction Coefficient Cystines
- 11375
Absorbance 280nm
- 325
Polar Residues
- 13
DRAMP03285
Comments Information
PTM
- Contains three disulfide bonds 3-29; 8-23; 13-30.
Literature Information
- ·Literature 1
-
Title
- Purification and characterization of the antimicrobial peptide, ostricacin.
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Pubmed ID
- 16459058
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Reference
- Biotechnol Lett 2001; 23: 207-210.
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Author
- Yu, PL, Choudhury SD, Ahrens K.