General Information

    • DRAMP ID

    • DRAMP03292

    • Peptide Name

    • Defensin-B1 (DefB1; OaDefB1; mammals, animals)

    • Source

    • Ornithorhynchus anatinus (Duckbill platypus)

    • Family

    • Belongs to the beta-defensin family

    • Gene

    • Not found

    • Sequence

    • GMKEKCVTMGGYCRKQCRVQDALSGYCRNENPCCV

    • Sequence Length

    • 35

    • Protein Existence

    • Transcript level

Activity Information

    • Biological Activity

    • Antimicrobial

    • Target Organism

    • No MICs found in DRAMP database

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

      • Not included yet

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Not included yet

    • N-terminal Modification

    • Not included yet

    • C-terminal Modification

    • Not included yet

    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet

    • Stereochemistry

    • Not included yet

    • Structure

    • Not found

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP03292 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

    • There is no predicted structure for DRAMP03292.

Physicochemical Information

    • Formula

    • C158H261N51O50S8

    • Absent Amino Acids

    • FHIW

    • Common Amino Acids

    • C

    • Mass

    • 3931.6

    • PI

    • 8.65

    • Basic Residues

    • 6

    • Acidic Residues

    • 3

    • Hydrophobic Residues

    • 5

    • Net Charge

    • +3

    • Boman Index

    • -79.37

    • Hydrophobicity

    • -0.571

    • Aliphatic Index

    • 38.86

    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour

    • Extinction Coefficient Cystines

    • 3355

    • Absorbance 280nm

    • 98.68

    • Polar Residues

    • 16

DRAMP03292

DRAMP03292 chydropathy plot

Comments Information

    • Function

    • Has antimicrobial activity (By similarity).

    • Tissue specificity

    • Expressed at low levels in kidney, lung, and spleen.

    • PTM

    • Contains three disulfide bonds (By similarity).

Literature Information

  • ·Literature 1

    • Title

    • Defensins and the convergent evolution of platypus and reptile venom genes.

    • Reference

    • Genome Res. 2008 Jun;18(6):986-994.

    • Author

    • Whittington CM, Papenfuss AT, Bansal P, Torres AM, Wong ES, Deakin JE, Graves T, Alsop A, Schatzkamer K, Kremitzki C, Ponting CP, Temple-Smith P, Warren WC, Kuchel PW, Belov K.
  • ·Literature 2

    • Title

    • Expression patterns of platypus defensin and related venom genes across a range of tissue types reveal the possibility of broader functions for OvDLPs than previously suspected.

    • Reference

    • Toxicon. 2008 Sep 15;52(4):559-565.

    • Author

    • Whittington CM, Papenfuss AT, Kuchel PW, Belov K.