General Information
-
DRAMP ID
- DRAMP03455
-
Peptide Name
- Beta-defensin 49 (Protein Defb49; rodents, mammals, animals)
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Source
- Rattus norvegicus (Rat)
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Family
- Belongs to the beta-defensin family
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Gene
- Defb49
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Sequence
- MKLPVLFLLFCFLDLLKTVKAEMKDTLFCFLKKGKCRHVCMNVEKRVGPCTKLNANCCIFVRDMRAIIPEDQRTVSIKIRNKQN
-
Sequence Length
- 84
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UniProt Entry
- Q32ZF1
-
Protein Existence
- Homology
Activity Information
-
Biological Activity
- Antimicrobial
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Target Organism
- No MICs found in DRAMP database
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Hemolytic Activity
-
- No hemolysis information or data found in the reference(s) presented in this entry
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Cytotoxicity
-
- Not included yet
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Binding Target
- Not found
Structure Information
-
Linear/Cyclic
- Not included yet
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N-terminal Modification
- Not included yet
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C-terminal Modification
- Not included yet
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Nonterminal Modifications and Unusual Amino Acids
- Not included yet
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Stereochemistry
- Not included yet
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Structure
- Not found
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Structure Description
- Not found
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Helical Wheel Diagram
-
PDB ID
- None
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Predicted Structure
- There is no predicted structure for DRAMP03455.
Physicochemical Information
-
Formula
- C436H728N122O111S11
Absent Amino Acids
- WY
Common Amino Acids
- KL
Mass
- 9807.99
PI
- 9.63
Basic Residues
- 18
Acidic Residues
- 7
Hydrophobic Residues
- 31
Net Charge
- +11
-
Boman Index
- -122.87
Hydrophobicity
- 0.07
Aliphatic Index
- 97.38
Half Life
-
- Mammalian:30 hour
- Yeast:>20 hour
- E.coli:>10 hour
Extinction Coefficient Cystines
- 375
Absorbance 280nm
- 4.52
Polar Residues
- 19
DRAMP03455
Comments Information
Function Has antibacterial activity (By similarity).
Literature Information
- ·Literature 1
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Title
- Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract.
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Pubmed ID
- 16033865
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Reference
- Physiol Genomics. 2005 Sep 21;23(1):5-17.
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Author
- Patil AA, Cai Y, Sang Y, Blecha F, Zhang G.