General Information

    • DRAMP ID

    • DRAMP04454

    • Peptide Name

    • Defensin EGAD1

    • Source

    • Elaeis guineensis var. tenera (Oil palm)

    • Family

    • Not found

    • Gene

    • Not found

    • Sequence

    • MEHSRRMLPAILLLLFLLMPSEMGTKVAEARTCESQSHKFQGTCLRESNCANVCQTEGFQGGVCRGVRRRCFCTRLC

    • Sequence Length

    • 77

    • Protein Existence

    • Predicted

Activity Information

    • Biological Activity

    • Antimicrobial

    • Target Organism

    • No MICs found in DRAMP database

    • Hemolytic Activity

      • No hemolysis information or data found in the reference(s) presented in this entry

    • Cytotoxicity

      • Not included yet

    • Binding Target

    • Not found

Structure Information

    • Linear/Cyclic

    • Not included yet

    • N-terminal Modification

    • Not included yet

    • C-terminal Modification

    • Not included yet

    • Nonterminal Modifications and Unusual Amino Acids

    • Not included yet

    • Stereochemistry

    • Not included yet

    • Structure

    • Not found

    • Structure Description

    • Not found

    • Helical Wheel Diagram

    • DRAMP04454 helical wheel diagram

    • PDB ID

    • None

    • Predicted Structure

Physicochemical Information

    • Formula

    • C365H604N116O106S12

    • Absent Amino Acids

    • DWY

    • Common Amino Acids

    • LRC

    • Mass

    • 8698.24

    • PI

    • 8.96

    • Basic Residues

    • 13

    • Acidic Residues

    • 6

    • Hydrophobic Residues

    • 22

    • Net Charge

    • +7

    • Boman Index

    • -151.05

    • Hydrophobicity

    • -0.108

    • Aliphatic Index

    • 70.91

    • Half Life

      • Mammalian:30 hour
      • Yeast:>20 hour
      • E.coli:>10 hour

    • Extinction Coefficient Cystines

    • 500

    • Absorbance 280nm

    • 6.58

    • Polar Residues

    • 26

DRAMP04454

DRAMP04454 chydropathy plot

Comments Information

    • Comment

    • No comments found on DRAMP database

Literature Information

  • ·Literature 1

    • Title

    • Characterization of a defensin gene expressed in oil palm inflorescences: induction during tissue culture and possible association with epigenetic somaclonal variation events.

    • Reference

    • J Exp Bot. 2002 Jun;53(373):1387-1396.

    • Author

    • Tregear JW, Morcillo F, Richaud F, Berger A, Singh R, Cheah SC, Hartmann C, Rival A, Duval Y.